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PLM2_5_b1_sep16_scaffold_10241_5

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: comp(5074..5703)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma subunit, ECF family Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RUF6_BLASD similarity UNIREF
DB: UNIREF100
  • Identity: 79.4
  • Coverage: 189.0
  • Bit_score: 297
  • Evalue 6.20e-78
RNA polymerase, sigma subunit, ECF family similarity KEGG
DB: KEGG
  • Identity: 79.4
  • Coverage: 189.0
  • Bit_score: 297
  • Evalue 1.70e-78
RNA polymerase, sigma subunit, ECF family {ECO:0000313|EMBL:CCG01921.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 189.0
  • Bit_score: 297
  • Evalue 8.60e-78

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Taxonomy

Blastococcus saxobsidens → Blastococcus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGGCGGTGTTCGCATCGTCGAAAGCGTCGGATACCGGAGGTGCCGTGATCGACGCCTCGGCATCCACGTGGGTGCCCCCGACCTGGGACGAGGTCGTGCGTGAGCACACCGCCCGGGTCTACCGCCTTGCCTACCGGCTGTCCGGAAACCAGCAGGACGCCGAGGATCTGACCCAGGAGACGTTCGTGCGCGTCTTCCGGTCGCTGGCCGACTACACCCCCGGCACGTTCGAGGGTTGGCTGCACCGGATCACCACGAACCTGTTCCTGGACATGGTCCGTCGCCGCCAGCGCATCCGTTTCGACGCGCTGCCCGACGACACCGAGCGCCTGCCGGGCCGGGAGCGTAGTCCCGAGCAGGTCTATGCGGAGGGCGCCTTCGACGCGGACGTACAGGCCGCGCTCGACGCGCTGCCGCCCGACTTCCGCGCCGCCGTGGTCCTCTGCGACATCGAGGGCCTGTCGTACGAGGAGATCGCGGCCACCCTCGGGATCAAGCTCGGCACCGTGCGGTCCCGGATCCACCGGGGCCGGGTGCTGCTGCGGGAGGCGTTGGCGCACCGCGCGCCACGGTCGGCCCGTGTCGGCACGGAGGAGGCGACCTCGGCGGCCGAGGGAGGTGCGGCGTGA
PROTEIN sequence
Length: 210
MAVFASSKASDTGGAVIDASASTWVPPTWDEVVREHTARVYRLAYRLSGNQQDAEDLTQETFVRVFRSLADYTPGTFEGWLHRITTNLFLDMVRRRQRIRFDALPDDTERLPGRERSPEQVYAEGAFDADVQAALDALPPDFRAAVVLCDIEGLSYEEIAATLGIKLGTVRSRIHRGRVLLREALAHRAPRSARVGTEEATSAAEGGAA*