ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

PLM2_5_b1_sep16_scaffold_11210_4

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: comp(2438..3613)

Top 3 Functional Annotations

Value Algorithm Source
High-affinity nickel transport protein Tax=Actinoplanes sp. N902-109 RepID=R4LH56_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 76.9
  • Coverage: 372.0
  • Bit_score: 583
  • Evalue 1.40e-163
Transition metal uptake transporter, Ni2+-Co2+ transporter (NiCoT) family protein {ECO:0000313|EMBL:CQD22857.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium lentiflavum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 383.0
  • Bit_score: 589
  • Evalue 3.50e-165
high-affinity nickel transport protein similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 372.0
  • Bit_score: 583
  • Evalue 3.90e-164

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mycobacterium lentiflavum → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1176
GTGAGCGACAGCACCACGGCCGTGGACGCCTCGCGGTTCGCCCAATTCCGCGGCAGCTTGACCCGGCGCGACTGGACCTCGCTCGGCGGGATGTACGGGTTCATCATCCTGCTGCACGTCGTCGGCTTCGGCGTCCTGCTCGGCTTCGTGGTGCCGAACCACTACCAGCTCGGTGGTGATCACCCGGTCTTCTCGATCGGCGTCGGCATCCTCGCGTACACGTTCGGGCTGCGGCACGCGTTCGACGCCGACCACATCGCGGCGGTGGACAACACGACGCGGAAGCTGATGGCCGACAACGCCGAGAAGGAAGCCGCCGGCGTCGCCGGTACCGAGATCCGCCAGCCGCTCTCGGTCGGGTTCTGGTTCTCCCTCGGCCACTCCACGATCGTGTTCGCGCTGGCGTTCCTGCTCTCCGTCGGGGTGAAGGCGCTCGCCGGGCAGGTCGAGAGCGACAACTCCGGGCTGCACTCGGTCACCGGAGTCGTCGGCGCCTCGGTCTCCGGCGTCTTCCTCTGGGTGCTCGGGATCCTCAACCTGGTCGTGCTGTTCGGGATCCTCAAGGTGTTCCGGGAGATGCGCACCGGCCGGTACGACGAGGCCCAGCTCGAGGACCACCTGAACAAGCGCGGCTTCATGAACCGGTTCCTCGGCGGGCTGACCAGGTCGGTCCGCAAGGCCTGGCACATCTACCCGATCGGCGTGCTGTTCGGGCTCGGATTCGACACCGCGACCGAGGTCGGCCTGCTCGTGCTGGCCGGCGGCGCCGCGGCGTTCAACCTGCCGTTCTACGCGATCCTCGTGCTGCCGATCCTGTTCGCGGCCGGCATGTGCCTGATGGACACCACCGACGGCGTGTTCATGAATGCCGCGTACGGCTGGGCGTTCGCCAAGCCGGTTCGGAAGGTCTTCTACAACATCACGATCACGTCGATCTCCATCGCGGTGGCGCTGATCATCGGCACCATCGAGCTGGTCGGCGTCCTCGCCGACCAGGCCAAGATCGACTCCGGGCCGCTCTCGGCCATCGCGTCCATCCCGCTCGACTACGCCGGCTACGCGATCGTCGCGTTCTTCTTCCTCGCCTGGATCACCGCCCTCGCCGTCTGGCGGTTCGGCCGCATCGAGGAGAAGTGGTCGGCGAACCTCGCCCCCGGCACCAACCCAAGCCGCTGA
PROTEIN sequence
Length: 392
VSDSTTAVDASRFAQFRGSLTRRDWTSLGGMYGFIILLHVVGFGVLLGFVVPNHYQLGGDHPVFSIGVGILAYTFGLRHAFDADHIAAVDNTTRKLMADNAEKEAAGVAGTEIRQPLSVGFWFSLGHSTIVFALAFLLSVGVKALAGQVESDNSGLHSVTGVVGASVSGVFLWVLGILNLVVLFGILKVFREMRTGRYDEAQLEDHLNKRGFMNRFLGGLTRSVRKAWHIYPIGVLFGLGFDTATEVGLLVLAGGAAAFNLPFYAILVLPILFAAGMCLMDTTDGVFMNAAYGWAFAKPVRKVFYNITITSISIAVALIIGTIELVGVLADQAKIDSGPLSAIASIPLDYAGYAIVAFFFLAWITALAVWRFGRIEEKWSANLAPGTNPSR*