ggKbase home page

PLM2_5_b1_sep16_scaffold_12004_1

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: comp(1..147)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 49.0
  • Bit_score: 95
  • Evalue 1.20e-17
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 91.8
  • Coverage: 49.0
  • Bit_score: 90
  • Evalue 7.60e-17
DNA-directed RNA polymerase subunit omega Tax=Catelliglobosispora koreensis RepID=UPI000363E2D5 similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 49.0
  • Bit_score: 92
  • Evalue 7.00e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Cryptosporangium arvum → Cryptosporangium → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 147
TTGGCCGGCACCGTCGCGGTCCCCGAGGGCATCACCAACCCGCCCATCGACGAGCTGCTCGAGCGCACCAGCTCGAAGTACGCGCTCGTGATCTACGCCGCCAAGCGCGCGCGGCAGATCAACGCGTACTACTCCCAGCTCGGTGAG
PROTEIN sequence
Length: 49
LAGTVAVPEGITNPPIDELLERTSSKYALVIYAAKRARQINAYYSQLGE