ggKbase home page

PLM2_5_b1_sep16_scaffold_13263_6

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: 4916..5425

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036371E0 similarity UNIREF
DB: UNIREF100
  • Identity: 61.3
  • Coverage: 163.0
  • Bit_score: 186
  • Evalue 2.10e-44
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 61.1
  • Coverage: 167.0
  • Bit_score: 179
  • Evalue 7.30e-43
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 167.0
  • Bit_score: 179
  • Evalue 3.60e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Kribbella flavida → Kribbella → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 510
GTGCTCGTCGCGCGATACGCCACGGTCGCGCACCGCACGGCCGCTCTGCTCGGCGGCGGGGACGACGCGGCGGACATCGTCCAGGAGGCGTTCGTCAAGGCGTTCCGAGGACTGCGCGGGTTCCGCCCGGACGCCCCGTTCCGCCCGTGGTTGTTGAAGATCGTCGCGAACGAGACCCGCAACGTGCAACGGTCCGCCCGCCGTCGGGCCGGTGCCTACCTGCGGCTGGCGGACGAGGCGGCCCACTCGCCGGCCGGGACCGACCCGTCGCCGGAGCTGGCCGCGCTGGCCGCCGACCGTCGAGCCCGGCTGCTGGCCGCGGTCCGCGGGCTGCCCGAGCGCGACCAGCTGGTAATCACCTGCCGGTACTTCCTGGAGTTCGACGAGACGGAGACGGCGACAGTGCTCGGCTGGCCGCGCGGGACGGTGAAGTCCCGGCTGTCCCGCGCGCTGCGGCGGCTGCGACTGCAGCTCGACGAGGAGCTCGGGACGGAGGTGCGCCGTGCCTGA
PROTEIN sequence
Length: 170
VLVARYATVAHRTAALLGGGDDAADIVQEAFVKAFRGLRGFRPDAPFRPWLLKIVANETRNVQRSARRRAGAYLRLADEAAHSPAGTDPSPELAALAADRRARLLAAVRGLPERDQLVITCRYFLEFDETETATVLGWPRGTVKSRLSRALRRLRLQLDEELGTEVRRA*