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PLM2_5_b1_sep16_scaffold_14401_2

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: 590..1105

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FEW3_VERMA similarity UNIREF
DB: UNIREF100
  • Identity: 56.3
  • Coverage: 167.0
  • Bit_score: 182
  • Evalue 3.10e-43
RNA polymerase sigma-E factor {ECO:0000313|EMBL:EWM66237.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 157.0
  • Bit_score: 183
  • Evalue 1.90e-43
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 167.0
  • Bit_score: 182
  • Evalue 8.70e-44

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Taxonomy

Micromonospora sp. M42 → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 516
GTGCGGCGGGACGACGAGTTCACCGCGTACGTGGCGGCGCGGGCGAGGCTGCTGCGGCGCTCCGCGTACCTGCTGTGCGGGGACTGGCACCGGGCGGAGGACCTGACCCAGTCCGCGCTCACCAAGGTCTACCTGGCCTGGTCAAGGGTGCGCCGGGCCGACAACGTCGACGGGTACGTCCGGCAGGTCCTGGTCCGGACGTACCTGGACGAACAGCGGCGGCGGTGGCGACAGGAACAGCCGACCGGCGAGACGCTCGACGGGCTGCGGTCCGACCCGGCGACGGCCAGCGACCAGCGGCTCGATCTGCTGCGGGCGCTGGCCACGCTGCCGCCCCGGCAGCGCGCGGCGGTGGTGCTGCGCTGCTGGGAGGACCTGTCGATCACCGAGGTGGCCCGGGCGCTGGACTGCAGCGAGGGCACCGTGAAGAGCCAGACGTCCAGGGGGCTGGCCGCGCTGCGCGGCGTGCTCGCCCCCGGCCGGTACGACGGCCAGCCGGAAGGAGCCTGCCGGTGA
PROTEIN sequence
Length: 172
VRRDDEFTAYVAARARLLRRSAYLLCGDWHRAEDLTQSALTKVYLAWSRVRRADNVDGYVRQVLVRTYLDEQRRRWRQEQPTGETLDGLRSDPATASDQRLDLLRALATLPPRQRAAVVLRCWEDLSITEVARALDCSEGTVKSQTSRGLAALRGVLAPGRYDGQPEGACR*