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PLM2_5_b1_sep16_scaffold_12359_8

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: comp(5437..5934)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreA Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WKR5_ACTMD similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 165.0
  • Bit_score: 226
  • Evalue 1.10e-56
transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 73.3
  • Coverage: 165.0
  • Bit_score: 226
  • Evalue 3.00e-57
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00003926}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 165.0
  • Bit_score: 226
  • Evalue 1.50e-56

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Taxonomy

Actinosynnema mirum → Actinosynnema → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 498
GTGTCGATGACGGAAAACACTGCACCCGTCACCTGGCTCACGCGGGAGGCTTACGACCGCCTCAAGGTCGAGCTGGACAACCTGATCGAGAACCGGACGTCCATCAGCGCCGAGATCAGCGCGCGCCGCGAGGAGGGCGACCTCCGGGAGAACGGCGGCTATCACGCCGCTCGCGAGGAGCAGGGCAAGCAGGAGGCGCGGATCCGGCAGCTGCAGGAGCTGCTGCGCACCGCGCAGGTGGGCGAGACGCCCACGGACTCCGGCATCGCGGGGCCGGGCATGGTGGTGACCGTCCGGTTCGAGGACGACGAGGAGAGCGAGACGTTCCTCATCGGCTCCCGCGAGGAGACCGGCGCCGACCTGGAGGTCTACTCCGCGGCCTCGCCGCTGGGCAAGGCACTGGACGGCGCCAAGGTCGGCGAGACCCGCACGTACGAGACGCCGAACGGCAAGACGATGCGCGTCACCCTGCAGAAGGCGGAGCCGTTCCACGAGTAG
PROTEIN sequence
Length: 166
VSMTENTAPVTWLTREAYDRLKVELDNLIENRTSISAEISARREEGDLRENGGYHAAREEQGKQEARIRQLQELLRTAQVGETPTDSGIAGPGMVVTVRFEDDEESETFLIGSREETGADLEVYSAASPLGKALDGAKVGETRTYETPNGKTMRVTLQKAEPFHE*