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PLM2_5_b1_sep16_scaffold_15777_1

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: comp(2..3169)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, putative ATPase, winged helix family Tax=Frankia sp. CN3 RepID=G6HIX7_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 1099.0
  • Bit_score: 1046
  • Evalue 0.0
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 679.0
  • Bit_score: 748
  • Evalue 1.40e-213
Tetratricopeptide TPR_4 {ECO:0000313|EMBL:ADB74336.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 679.0
  • Bit_score: 748
  • Evalue 7.20e-213

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Taxonomy

Geodermatophilus obscurus → Geodermatophilus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3168
GTGGCAGGACGCGACGGGCTCCGGGTCCGGATCCTCGGCAGGCTCGACGCCTGCGACGGCGACGCCGAGATCGACCTCGGCGGTCGCCGTCAGCGTGCTGTCCTGGCCGTGCTGGTGCTGGCCCGCGGCGAGATCGTGCCGGCCGAGCGCATCGCCGACTGCCTGTGGGCCGACGACCTTCCCGGCAACGTCAGCGGCGCCGTCCAGTCGTACGTGTCCCACCTCCGGCGGCGGCTCCAGCCCGACGGCGCGCCGCGCTCCCGGCGCGGGATCATCGCCAGCGCCGGTTCCGGGTACGCCGTCCGGCTGCCGCCGGACGCGGTGGATGCCTGGTGGTTCGAGCAGCTGGTCCGGGACGCCGCGACCGCCTCGGCCGCGGGCGAGCCGCAGCGGGCCGCCGACCTGCTCACCGAGGCGCTCGCGCTCTGGCGCGGCCCGGCCCTGAGCGACTACGCGGGCGAGCCGTGGGCGGAAGCCGAGATCGCCCGGCTCACCGAGCTACGCGCGGTCGCCCGGGAGCGGCTGCTCGCCGCCCGGCTCGACTGCGGCGAGGCCGCGCTGCTCGCACCGGAGCTGGAGGCGCTGGTCGCGGACGAGCCGCTGCGGGAGGAGCGGTGGCGGCTGCTCGTGCTCGCGCTGTACCGCGCCCACCGGCAGGCGGACGCGCTCGCCGCGCTCCGGCGGGCGCGGAACCTCCTCTCGGCCGAGCTGGGCATCGACCCCGGACCGGCGCTGCGGGGGCTCGAGGCCGAGGTGCTGGCCCAGTCACCGGCGCTCGCCACCCCGGCGCCGCCGCGCGCCCCGACCCCACCCCGCCCGTCCGTGGCCGGGCCGCCGGAGGCGTGGCCCCCGGCCGCCGCGATGGGGCCGTCGCGCGCGGCCGGGCCCGCGCCACCCGGCGTCCCGCCTGACCTCGTCGACCGCGACGACGAGCTGAATGTGATCCGGCACGCGGTCGCCGATCTCGCCGCCGGCGCCTCGCAGCTGCTGCTCATCGAGGGCCCGCCCGGCGTCGGCAAGACCCGGCTGCTCGCCGAGGCCCGCCGGCTGGCCGCCGAGCAGGACCTGACCGTCCTCGGCGCCCGGGGCAGCCAGCTCGAACGGACCTTCGGCTTCGGCGCCGTACGGCAGCTGTTCGAGCCCGTGCTCGTCGACCCCGACCGGCGCGAGCCGCTGCTGTCCGGCGCGGCGGCCAGCGCGCGCGGGGTGTTCGACGTGCTGGACGAGCCGGCCGAGGGCTCGTTCGCGGTCCTGCACGGGCTCTACTGGCTGGCCGCCGGCCTCGCCTCCGAGCGGCCGCTGGTGCTGGCGATCGACGACCTGCAGTGGTGCGACACCGCCTCGCTGCGGTTCGTCGTGTACCTGTCCCGCCGCCTCGACGGGCTGCCGCTGTTGCTGGTGGCGACGCTGCGGACCGGCGAGCGGCACGAGGACGACGACCTGCTCGCCGAGGTCCTGCTCGACCCGTCCACGACGGTGGTCCGGCCCGGCCCGCTGACCCGGGAGGGGACGGCGGAGCTGGTCCGCCGCCGGCTCGGCGAGCCCGCGCCGCTGTTCCTGACCGCCTGCCACACGACGACCGCGGGCAACCCGCTGCTGCTCCGCCAGCTGCTGCGGGCGCTGGAGGCCGACCGCGTCCGCCCCGACGCCGCCCACGCGGACCGCGTCATGGCCTGCGGTTCGCGCGCCGTCGCCAGCATGGTGCTGACCCGGATGCGCCGGCTGCCGGACGACGCGACGACGGTCGCGAGCGCGGTGGCGGTGCTCGGTGAGCGCGCCGACCTGCCGTCGATCGCCGAGATGTCGGACCTGGACGAGATCACGACCGCGGCCGCCCTCGCGGACCTGGCCCGGGCGGAGATCCTGCGCGACGAGGACCCGGTCGGGTTCGTCCACCCGCTGGTCCGGGACGCCGTCTACCGGGCGGTGCCCAGCGCGGAGCGCGCCCTGGCTCACGAACGGGCCGGGCGGCTGCTGCGGCTGCGCGGCGGGTCGGCCGAGCAGGTCGGCGCCCACCTGCTGCTGGCGCCCAGCCGGGGTGACGCCGGCAGCGTCGAAGTGCTCGGCGCCGCGGCACGGACGGCGGCCGCCCGCGGGGCCTCGGAGAGCGCGGTCACCTACCTGCGCCGCGCGCTGGCGGAGCCGGCCGAGGGACCGGCCCGGCTCGGCGTGCTGCGCTCCCTCGGCCTGCTGGAGACGCTGGTCGACGGCCCGGCCGGGCTGGAGCACCTCGGCGCCGCGTACGAGCTGGCGACCGAGCCGGCCGACCGGGCCGAGCTGGCCGTCGCGATCGCCTGGACGCACGTGTTCACCAGCTCGCCCGGGGTCGCCGCCGCGTTCGCCCAGGATGCCTCCGCGGCGCTGCCGGACGAGCTGGTGGACGCGCGGCAGGGCCTGGTCGCCCTGCAGCGGATCAGCGGCTTCATGCACGGGCTCGACCCGGCCCGGTGGCAGGCCGGCCCCGAGCCCGTCGTGCGGGGCGAGGGCGACGGCGCCCGGATGCTGGCCGCGACCCTGGCCTGGGAGGTCGCCTGCGCGGGCACCGACCGGGACCGGGCCGTACGGCTGGCCCGGTTCGCCCTGCAGGAGGACCGGCTGTTCGCGGTGGACAGCGGGCTGTTCTGGGTGGTGGCGGCCAACGCGCGGATGATCGCCGACGACGATCTCGGGGACTTCTGGGAGCGGGCCCGCGCCCAGGCACACGTCCGCGGCTCGCTGTTCACCGCGCTGTCGGTGAACCTGTGGCAGGGCCTGTGGCAGTGGCGCCGCGGTGAGCTGGCCGACGCGGTGGCGTGCTTCGAGGCGATGCTGGAGCAGGAGCACATGTGGGGCGGCTCCGGCACCGGCCGCTCGTACGCGCTGGCCTTCCTGGTCGGGACCCACCTCGACCGCGGCGACCTCGACGCCGCCCGGGCGGCCGCCGAGCTTGGCGTCGCCGAGGAGCCGGGCGGCGAGGGCGGCCGGCTGGTGCGGCACGCGGTCGCCCGGTTGCGGGTCGTCGATGGCGACTGGGCCGGGGCACTGACGCTCGTCGACGCCGCCGGCGACTCGGCCCTCGGCGGAGCCAACCCGGCCTGGAACCGGCGGCGCGCCCTGCGGGCCGCGGCACTGGCCGGTCTCGGGCGCCGGCCGGAGGCGGTCGAGCTGCAGCAGGAGGAGATAGCGCTG
PROTEIN sequence
Length: 1056
VAGRDGLRVRILGRLDACDGDAEIDLGGRRQRAVLAVLVLARGEIVPAERIADCLWADDLPGNVSGAVQSYVSHLRRRLQPDGAPRSRRGIIASAGSGYAVRLPPDAVDAWWFEQLVRDAATASAAGEPQRAADLLTEALALWRGPALSDYAGEPWAEAEIARLTELRAVARERLLAARLDCGEAALLAPELEALVADEPLREERWRLLVLALYRAHRQADALAALRRARNLLSAELGIDPGPALRGLEAEVLAQSPALATPAPPRAPTPPRPSVAGPPEAWPPAAAMGPSRAAGPAPPGVPPDLVDRDDELNVIRHAVADLAAGASQLLLIEGPPGVGKTRLLAEARRLAAEQDLTVLGARGSQLERTFGFGAVRQLFEPVLVDPDRREPLLSGAAASARGVFDVLDEPAEGSFAVLHGLYWLAAGLASERPLVLAIDDLQWCDTASLRFVVYLSRRLDGLPLLLVATLRTGERHEDDDLLAEVLLDPSTTVVRPGPLTREGTAELVRRRLGEPAPLFLTACHTTTAGNPLLLRQLLRALEADRVRPDAAHADRVMACGSRAVASMVLTRMRRLPDDATTVASAVAVLGERADLPSIAEMSDLDEITTAAALADLARAEILRDEDPVGFVHPLVRDAVYRAVPSAERALAHERAGRLLRLRGGSAEQVGAHLLLAPSRGDAGSVEVLGAAARTAAARGASESAVTYLRRALAEPAEGPARLGVLRSLGLLETLVDGPAGLEHLGAAYELATEPADRAELAVAIAWTHVFTSSPGVAAAFAQDASAALPDELVDARQGLVALQRISGFMHGLDPARWQAGPEPVVRGEGDGARMLAATLAWEVACAGTDRDRAVRLARFALQEDRLFAVDSGLFWVVAANARMIADDDLGDFWERARAQAHVRGSLFTALSVNLWQGLWQWRRGELADAVACFEAMLEQEHMWGGSGTGRSYALAFLVGTHLDRGDLDAARAAAELGVAEEPGGEGGRLVRHAVARLRVVDGDWAGALTLVDAAGDSALGGANPAWNRRRALRAAALAGLGRRPEAVELQQEEIAL