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PLM2_5_b1_sep16_scaffold_16114_5

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: 3322..4311

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 factor Tax=Frankia sp. Iso899 RepID=UPI0003B7BA81 similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 331.0
  • Bit_score: 541
  • Evalue 5.00e-151
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 331.0
  • Bit_score: 540
  • Evalue 1.90e-151
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADP82454.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 331.0
  • Bit_score: 540
  • Evalue 9.20e-151

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Taxonomy

Frankia sp. EuI1c → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 990
GTGTCAGCAGAGCTGCTCGCGCGGGCGCGGGCCGGGGACCGGGACGCGTTCGCGGCGCTGGTCGAGCCGCACCGCCGCGAGCTCCAGGCGCACTGCTACCGCATGCTCGGCTCGCTTCAGGACGCCGAGGACGCGCTGCAGGAGACGCTGCTGGCGGCGTGGCTCGGCCTGGACGGCTTCGAGGGGCGCTCGTCCGTCCGCACCTGGCTCTACCGCATCGCCACCAACCGGTGCCTCAACCTGCTGCGCTCGTCCGCCCGGCGGCCGGCCGCCGCGGCGCCGCTGCCGGTGCCCGCGCCGGACCCCACCGGGCTCGGCGAGGTTCCGTGGCTGCAGCCGTACCCGGACGACCTGCTCGAAGGCCTGCCCGACCGCGCGCCCGGCCCGGAGGCCCGGTACGAGTCCCGGGAGGCGATCTCGCTCGCCTTCGTCACCGCCGTCCAGCTGCTGCCGCCGAACCAGCGCGCCGTGCTGCTGCTGCGCGACGTGCTCGGCTACCGCGCGAGCGAGACCGCGAACATCCTCGGGCTCACCGAGGACGCCGTCACCAATGCGGTCAAGCGCGCCCGCGCGACGATGGACGCGGGCCGCCCGCCGCGGCCGCCCGCGCCCGGCGGCCCGGAGGAGCAGGCGCTGCTCGACCGGTTCGTCGCGGCCTTCACCGACTCGGACGTCGACGCGCTGCTGGCGCTGATGACCGACGACGTCTGGGTACGGATGCCGCCGCTGCCGTTCGAGTACCGCGGGACCGAGGCGGTGCGCCGGTTCTTCACCGCGATCGACGCGCACCGGCGCCAGATCGGCCGGATGGTGCCGGTCCGGGCGAACGGCCAGCCCGGCTGGGGCGAGTACGTCCGCGACCCGGTCACCGGCAGCCTGCACCTCACCGGCATCGTCACGATCGCCCTGGCCGGCGACCGGATCCGCGAGATCACCCACTTCGAGACGACGGTTGCCCCCTACCTCGCCCTGCCCCGGACCCTCGACTAG
PROTEIN sequence
Length: 330
VSAELLARARAGDRDAFAALVEPHRRELQAHCYRMLGSLQDAEDALQETLLAAWLGLDGFEGRSSVRTWLYRIATNRCLNLLRSSARRPAAAAPLPVPAPDPTGLGEVPWLQPYPDDLLEGLPDRAPGPEARYESREAISLAFVTAVQLLPPNQRAVLLLRDVLGYRASETANILGLTEDAVTNAVKRARATMDAGRPPRPPAPGGPEEQALLDRFVAAFTDSDVDALLALMTDDVWVRMPPLPFEYRGTEAVRRFFTAIDAHRRQIGRMVPVRANGQPGWGEYVRDPVTGSLHLTGIVTIALAGDRIREITHFETTVAPYLALPRTLD*