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PLM2_5_b1_sep16_scaffold_17374_8

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: comp(3787..4296)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM Tax=Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 / JCM 7437 / NCTC 10488) RepID=D7AUB8_NOCDD similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 169.0
  • Bit_score: 203
  • Evalue 1.70e-49
16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 169.0
  • Bit_score: 203
  • Evalue 4.70e-50
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 185.0
  • Bit_score: 203
  • Evalue 1.40e-49

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Taxonomy

Micromonospora carbonacea → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 510
ATGGATCTCGTCGTCGGGCGGATCGGCAAGCCGCACGGCGTCCGCGGCGAGGTGACCGTCGACGTACGCACCGATGACCCGGACGCGCGGTTCGCGACCGGGTCGTCGCTGCGTACCGACCCGGCCGAGCGGGGGCCGCTCACGGTGACCGGCGGGCACCCGCGCTCCGGCGGGCTGGTCCTCGCGTTCGACGGGGTCGGGTCCCGGGAGGAGGCCGAGGCGCTGCGCGGGACCGTGCTGGTGGTCGACTCGGCCGAGCTGCCGGAGATCGAGGAGGCCGACGAGTGGTACGACCACCAGCTCGTCGGCCTGGCCGCCGTGGACCCGGCCGGTGCCGCGCTGGGCGAGGTCGCCGACGTCGTGCACGCGCCGGCGTCGGACCTGCTCGTGGTCCGGGACGCGGACGGCCGCGAGCACCTGGTGCCGTTCGTCCGGGAGCTGGTGCCGGCCGTCGACGTGCCGGGCGGCCGGGTCGTGGTCGACCCGCCGGAGGGGCTGTTCGACCTGTGA
PROTEIN sequence
Length: 170
MDLVVGRIGKPHGVRGEVTVDVRTDDPDARFATGSSLRTDPAERGPLTVTGGHPRSGGLVLAFDGVGSREEAEALRGTVLVVDSAELPEIEEADEWYDHQLVGLAAVDPAGAALGEVADVVHAPASDLLVVRDADGREHLVPFVRELVPAVDVPGGRVVVDPPEGLFDL*