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PLM2_5_b1_sep16_scaffold_16477_4

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: comp(2973..3524)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRU3_ACIC1 similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 183.0
  • Bit_score: 203
  • Evalue 1.80e-49
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 183.0
  • Bit_score: 203
  • Evalue 5.10e-50
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABK52153.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 183.0
  • Bit_score: 203
  • Evalue 2.50e-49

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Taxonomy

Acidothermus cellulolyticus → Acidothermus → Acidothermales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 552
GTGATCGGTCCCGGCTTCGGCGAGACGCTCGCCGGTGCCCGCGACGGCGATGAGCACGCGTTCGCGCTGCTCTGGCGCGACCTCAACCCCGCGGTGCTGCGCTACCTCCGGGTGGTCGCGCCGGGCACCGCCGAGGACACCGCGGCCGACGTGTGGCTGGAGGTCTGCCGGGGTCTTGAGCGGTTCCGCGGCAACGAGGCCGGCTTCCGGTCCTGGGTGTTCACCGTGGCCCGGATGCGCGCCATCGACGCGGCCCGGCAGGCCGCCCGGCGACCGGTACGGCCGATCCCGCCGGACCAGCTGCCCGACCGGCCGGCCGCCGACGACCCGGCCGAGGCCGCCGTCGAGGCGCAGGCGACCCGGGAGGCGCTGGCGCTGATCGCGACGCTGCCGCCGGACCAGGCCGAGGTCGTGGCCCTGCGGGTGATCGCCGGCCTGGACGCCGCGCAGGTCGGCGAGATCGTCGGCAAGCGGGCCGGCACGGTGCGCGTGCTCGCCCACCGCGGCCTGCGGCGGCTGGCCCAGCACCTGGCCGAGCGGACGGGGGTGTAA
PROTEIN sequence
Length: 184
VIGPGFGETLAGARDGDEHAFALLWRDLNPAVLRYLRVVAPGTAEDTAADVWLEVCRGLERFRGNEAGFRSWVFTVARMRAIDAARQAARRPVRPIPPDQLPDRPAADDPAEAAVEAQATREALALIATLPPDQAEVVALRVIAGLDAAQVGEIVGKRAGTVRVLAHRGLRRLAQHLAERTGV*