ggKbase home page

PLM2_5_b1_sep16_scaffold_12911_5

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: 2186..2536

Top 3 Functional Annotations

Value Algorithm Source
Anti-sigma factor antagonist Tax=Janibacter hoylei PVAS-1 RepID=K1ERW8_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 36.4
  • Coverage: 107.0
  • Bit_score: 71
  • Evalue 4.00e-10
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora griseola (Streptomyces griseolosporeus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.9
  • Coverage: 88.0
  • Bit_score: 80
  • Evalue 1.60e-12
anti-sigma factor antagonist similarity KEGG
DB: KEGG
  • Identity: 38.4
  • Coverage: 99.0
  • Bit_score: 72
  • Evalue 5.10e-11

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Kitasatospora griseola → Kitasatospora → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 351
ATGCCGTTCGCGGTGCGGAGCCGGCAGGCCGACGGCGTGACCGTGGTCGACGTCGGCGGCGAGGTCGACATCGAGACGGCGCCGCGGATGCGGGCCGCGCTGGCCGCGGCGGTCGACGCCGGGCTGCCGGTCGTGGTCGACCTGGGCGGGGTGACGTTCATGGACTCGTTCGGGTTCGGCGTGCTCGCCGCGGCGCACCAGCAGGGCGCCCGGGCCGGTACGCCGGTGCTGCTGCGGGCGGTCTCGCACCGGATCCGCCACCTGCTCGACCTGCTCGGCCTCGACGCGGTCCTGAACATCGAGCCGGAGCCGGACGGGCAGCGTCCGCAAGAACACCGCCCCCAGGGCTAG
PROTEIN sequence
Length: 117
MPFAVRSRQADGVTVVDVGGEVDIETAPRMRAALAAAVDAGLPVVVDLGGVTFMDSFGFGVLAAAHQQGARAGTPVLLRAVSHRIRHLLDLLGLDAVLNIEPEPDGQRPQEHRPQG*