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PLM2_5_b1_sep16_scaffold_30264_3

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: comp(557..1795)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Frankia sp. CN3 RepID=G6HL28_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 68.9
  • Coverage: 444.0
  • Bit_score: 578
  • Evalue 4.60e-162
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 412.0
  • Bit_score: 547
  • Evalue 3.20e-153
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:CCH88200.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.9
  • Coverage: 412.0
  • Bit_score: 547
  • Evalue 1.60e-152

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Taxonomy

Modestobacter multiseptatus → Modestobacter → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1239
GTGGACGGTCCCGGCGTGGCCGCGGCGGTGGCCGAGGCGCACCGTCGCGAGTGGGCGTTCGTGCTCGCCGCGACGGTGCGCGTCACCCGCGACATCGACCTCGCTGAGGAGTGCGTCCAGGACGCGTATGCGCGGGCCCTCGCGACCTGGGCCGATCGCGGCGTACCGGCGAAGCCCGGCGCCTGGCTGACCACCGTCGCCCGACGCCGGGCCCTCGACCTGCTCCGGCGGGAGGTGACGCTGCGCCGGGCTCTGCCGCTGCTCGTCGACGACGAGCCGGCCGGCGCGGCCGGCGGTCCGTTCCCGGACGACCGGCTGCGGCTGATCTTCACCTGCTGCCACCCGTCGCTCGCGACGGAAGCCCAGGTGGCGCTCACGCTGCGGCTGCTGTGCGGGCTCAGCACGGCCGAGGTGGCCAGGGCGTTCCTGCTCGCAGAGCCGACGATGGCCGCACGGATCACGCGGGCGAAGAAGAAGATCGCCACCGCCCGCATCCCGTACCGGATGCCGTCGGTGGCCGATCTGCCCGAACGCACCGAGGCGGTGCTGGCCGTGGTGCACCTGCTCTTCACGACCGGACACACCGCGCCGGCCGGTGCCGACCTGATCCGGCGTGACCTGGTCGAGCGGGCGCTCGACCTGGCCCGGATGCTGCGGGCGTTGCTGCCGGACGACGCCGACGTGGCGGCGCTGCTGGCGCTGATCCTGCTGACCGACGCGCGCCGGGAGACCAGGATCGCCGCGGACGGGCGGCTGCTGCTGCTCGCCGAGCAGGATCGCACCCGGTGGGACGCGGCCCAGATCGCGGAGGGGATCGACCTCGTCGAGGAGGCGCTGCGGCGCCGGCCGCGCAGCCGGCACACCTTGCAGGCCGCGATCGCGGCCGTGCATGCGCGGGCCGGCAGCTGGCCGGACACTGACTGGGGCCGGGTGGTCGATCTCTACGGCACGCTCGCCGAGGTGTGGCCGTCACCGGTGGTGGCGCTCAATCGGGCAGCGGCGCTCGGGTTCGCCCGCGGGCCGGAGGCGGGTCTGGCGGCGCTGGAGCCGCTGTCCGCCGAGCCGCAGCTCGCCGGGTACGGCTACCTGCCGGCGGCACGGGCGGCGTTCCTGGCCGAGCTCGGGCGGGTGGCCGAGGCGCGGCAGGCGTACCAGGAGGCGATCCTGCTGACCGAGAACGCCGTCGAGCGGGAGTTCCTGGCCGGGCGGCTCGCCGAGCTGGAGTCGTCCGGACGCTAG
PROTEIN sequence
Length: 413
VDGPGVAAAVAEAHRREWAFVLAATVRVTRDIDLAEECVQDAYARALATWADRGVPAKPGAWLTTVARRRALDLLRREVTLRRALPLLVDDEPAGAAGGPFPDDRLRLIFTCCHPSLATEAQVALTLRLLCGLSTAEVARAFLLAEPTMAARITRAKKKIATARIPYRMPSVADLPERTEAVLAVVHLLFTTGHTAPAGADLIRRDLVERALDLARMLRALLPDDADVAALLALILLTDARRETRIAADGRLLLLAEQDRTRWDAAQIAEGIDLVEEALRRRPRSRHTLQAAIAAVHARAGSWPDTDWGRVVDLYGTLAEVWPSPVVALNRAAALGFARGPEAGLAALEPLSAEPQLAGYGYLPAARAAFLAELGRVAEARQAYQEAILLTENAVEREFLAGRLAELESSGR*