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PLM2_5_b1_sep16_scaffold_39008_2

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: comp(152..856)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas luteoviolacea.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.6
  • Coverage: 142.0
  • Bit_score: 70
  • Evalue 3.30e-09
hypothetical protein Tax=Corynebacterium pilosum RepID=UPI0003606122 similarity UNIREF
DB: UNIREF100
  • Identity: 33.1
  • Coverage: 133.0
  • Bit_score: 62
  • Evalue 3.70e-07
collagen triple helix repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 34.7
  • Coverage: 101.0
  • Bit_score: 55
  • Evalue 1.70e-05

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Taxonomy

Pseudoalteromonas luteoviolacea → Pseudoalteromonas → Alteromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGACCTGTACGACGTGTTTGACCCTGAATCCGCCGGGCGCGCCGGCCTGCGTGCGCTGCAACACGCCGCTGGAGCCCGCCCCGGCCACGGACACCGGCCCGACCGCGGAGACCAGCCCGACCGCGGAGACCAGCCCGACCGCGGAGACCAGCCCGACCCCGGAGACCGGGCCGGCCGCGGTCCCGGGGATGGTGGCGGCACCGCCGCCGCCCGTGGGCTCCGTGGTGCCGGACCCGACCGAGGGCTCGAAGCGGATCGGACCTGGCCTGTCCGCCGCGGCCAAGGGCGCCCCGGGCTCGTCCCGGGCCCACGCCGCCGCCGTCCAGCCGCCCGGCTACGGCCTGAATGCCGGCGATCCCGAGCCACCCCCGCCGCCGGCCCCGGTCGAGGACCCTCGGGTCGCACGCCGGGTCGCGCTGGTCGGCGCGCTGCTGGTGGCGGCCGTGCTGCTGGCCGGCGGGGTGCTGCTCTGGCTGACCCGGCCCGCCTACCTCGACTCGGCCGCCGTGCAGCGGCAGATCGCCGACCAGCTGACCGGCCGGCTCGGCGGTCCGGTCGCCGTCAGCTGCCCCGGCGACCAGCGGCAGCGAGCGGGAGTGACGTTCCGGTGCACCGCGACCGACAATGCCGGGGGGCGGCGTGCGGTGACCGTCACGGTGGTGGACAATTCGGGCAAGTACACCTGGACCCTGGGGACCGCGTAG
PROTEIN sequence
Length: 235
MTCTTCLTLNPPGAPACVRCNTPLEPAPATDTGPTAETSPTAETSPTAETSPTPETGPAAVPGMVAAPPPPVGSVVPDPTEGSKRIGPGLSAAAKGAPGSSRAHAAAVQPPGYGLNAGDPEPPPPPAPVEDPRVARRVALVGALLVAAVLLAGGVLLWLTRPAYLDSAAVQRQIADQLTGRLGGPVAVSCPGDQRQRAGVTFRCTATDNAGGRRAVTVTVVDNSGKYTWTLGTA*