ggKbase home page

PLM2_5_b1_sep16_scaffold_55097_1

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: comp(74..1063)

Top 3 Functional Annotations

Value Algorithm Source
Integrase family protein Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I403_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 329.0
  • Bit_score: 455
  • Evalue 3.60e-125
Integrase {ECO:0000313|EMBL:KKC01555.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium nebraskense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.2
  • Coverage: 329.0
  • Bit_score: 463
  • Evalue 1.90e-127
Putative integrase/recombinase y4rC similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 330.0
  • Bit_score: 412
  • Evalue 1.00e-112

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mycobacterium nebraskense → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 990
ATGAGCGCGCTCGCCCCGACCCTGCAGGCGTTCTTCACCGACCGGCTGATCCGGCAGCGCCGGGCCAGCCCGCACACCATCACCGCCTACCGCAACACGCTGCGGATGCTGATCGTGTTCACCGCGCAGCGCACCGGCAAGCCGGCCCACCGGCTCGACGTCTCCGACCTCGACGCACCGCTGATCGCAGCGTTCCTCGACCATCTCGAACACAACCGCGCCAACAGCGTCCGCACCCGCAACGCCCGCCTCGCCGCGATCCACTCCCTGTTCCGGTTCGCCGCGCTGCGTCACCCCGAACACGCCGCCGACATCGAGCGGGTCCTGGCGATACCGGCGAAACGGGCCGACCACGCCCTGGTCACCTACCTCACCGAACCCGAGCTCGACACCCTGCTGGCCAGCCCGGACCGCAGCACCTGGACCGGCCGCCGCGACCACGCCCTGATCATGCTCGCCGCGCAGACCGGGCTGCGTGCCACCGAGCTGACCTCGCTGACCTGCGCCGACCTGCACCTCGCCGCCGGCGCCCATGTCAGCTGCCGCGGCAAGGGTCGTAAGGACCGGATCACCCCACTCACCGCCGGGACGGTCGCGGTCCTGCGGGCCTGGACCACCGAACGCGCCGGCGGGCCGACCGACCCGCTGTTCCCGACCCGTCGCGGTGGCCCGCTGTCGCTCGACGCACTCGAGCGGCGCGTCACCCACCACGCACGGGCCGCTGCGTGCGCCTGCCCGACCCTGGCCACGAAGAAGATCACACCGCATGTGCTGCGGCACACGGCGGCGATGCGGCTGCTGCACGCCGGGGTCGACACCACTGTGATCCCGTTATGGCTCGGTCACGAATCCGTGCAAACCACCCAGATCTACCTGCACGCCGACCTCAAGCTGAAAGAGCAAGCGCTGAACCGGACCACCCCGCCGACCAGCAGCCCCGGCCGCTACCGGCCCCCCGACCAGCTACTCGCGTTCCTCGAAGCGCTGTGA
PROTEIN sequence
Length: 330
MSALAPTLQAFFTDRLIRQRRASPHTITAYRNTLRMLIVFTAQRTGKPAHRLDVSDLDAPLIAAFLDHLEHNRANSVRTRNARLAAIHSLFRFAALRHPEHAADIERVLAIPAKRADHALVTYLTEPELDTLLASPDRSTWTGRRDHALIMLAAQTGLRATELTSLTCADLHLAAGAHVSCRGKGRKDRITPLTAGTVAVLRAWTTERAGGPTDPLFPTRRGGPLSLDALERRVTHHARAAACACPTLATKKITPHVLRHTAAMRLLHAGVDTTVIPLWLGHESVQTTQIYLHADLKLKEQALNRTTPPTSSPGRYRPPDQLLAFLEAL*