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PLM2_5_b1_sep16_scaffold_55097_3

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: comp(2006..3211)

Top 3 Functional Annotations

Value Algorithm Source
Probable phage integrase Tax=Rhizobium loti RepID=M5ALS4_RHILI similarity UNIREF
DB: UNIREF100
  • Identity: 61.2
  • Coverage: 394.0
  • Bit_score: 422
  • Evalue 3.20e-115
Site-specific recombinase XerD {ECO:0000313|EMBL:KDA41657.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.6
  • Coverage: 396.0
  • Bit_score: 485
  • Evalue 4.30e-134
Putative integrase/recombinase y4rA similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 390.0
  • Bit_score: 317
  • Evalue 5.30e-84

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Taxonomy

Frankia sp. BMG5.23 → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1206
GTGATCGTTGTGGTGGGCTCGCGGGTGATCGGTCCGATGGAGTCGTATGCGGCGGGGTTCGCCGCGGAGTTGGACCGATTGGGTTACACCCCGCTTTCTGTTGCGGGGCAGTTGAGGTTGGCCGCACATCTGAGCCGCTGGCTGGCCGGCGAGGGCCTGGACGTCGACGCGCTGACCCCGATGATCGCGGGGAGGTTCATCGCTGCGCGGGCGGCTGCCGGCTATACGGCCCACCGCTCACCGAAGGCGTTGTCGCCGCTGCTGGGATACCTGCGCGGGCTCGGGGTGGCCCCGTTGCCGACACCCGTGGTGGCGCGGGGCCCGGTCGAGATGCTGCTGGAGCGTTATTGCTGTTACCTCGTCGGCGAACGGGGAGTCGGGACCGCGACCGCGCGAGGGTATGCCGAGCTCGTCCGGCCGTTCGTGGTGTCCCGGGCCACCGCGGACGCGGTCGACCTGGCCGGTCTGTCGAGCGCGGATGTGGTGGGTTTCGTGCTCGCCGTCAGCGGCGAACGCAGCCCGAAGACGGCGCAGCGGACGGTGTCGGCGTTGCGGTCGCTGCTGCGGTTCTGCCACGTGCAGGGCTTGACCGGACTGCTGGACACGGCGGTCCCATCGGTGGCCAACCGGCGGGCCGGGCTGCCGCGGTTCCTGGAACCCGCCCAGGTGGCGGGACTGCTGGCATCGTGTGACCGGACAACGGTCGCGGGGCGCCGCGACTTCGCGATGATGACCATGATGGTGCGCCTCGGGCTGCGCGCCGGAGAGATCGCCGCCCTGCGCCTGGACGATCTCGACTGGCGGTCCGGGGAGATCACCGTTGTCGGAAAAGGCCCCCGCCGTGACCGGCTACCGTTGCCCGCCGACGTCGGCGAGGCGATCGCCGGCTACCTGCGCCACGCCCGCCCCGGGGCCATCGACCGGCAGGTGTTCGTCCGGGTCAAGGCCCCGCACCGCGCGCTGACCTCCGGCGGGGTGACCCAGGCGGTGATCGCCGCCGGGACCCGGGCCGGGCTGGGCCCGATCAGCGCGCACCGGCTGCGGCACACCGCAGCCACCGCCATGCTGCGCGCCGGAGCACCGCTGGCCCAGGTCGGGCAGGTGCTGCGGCACCGCCGCGCGCTGACCACCGAGACCTACGCCAAGGTCGACCGCGACGCACTGCGCGCGCTGGCCCGACCCTGGCCGGAGGCGCGGCATGACTGA
PROTEIN sequence
Length: 402
VIVVVGSRVIGPMESYAAGFAAELDRLGYTPLSVAGQLRLAAHLSRWLAGEGLDVDALTPMIAGRFIAARAAAGYTAHRSPKALSPLLGYLRGLGVAPLPTPVVARGPVEMLLERYCCYLVGERGVGTATARGYAELVRPFVVSRATADAVDLAGLSSADVVGFVLAVSGERSPKTAQRTVSALRSLLRFCHVQGLTGLLDTAVPSVANRRAGLPRFLEPAQVAGLLASCDRTTVAGRRDFAMMTMMVRLGLRAGEIAALRLDDLDWRSGEITVVGKGPRRDRLPLPADVGEAIAGYLRHARPGAIDRQVFVRVKAPHRALTSGGVTQAVIAAGTRAGLGPISAHRLRHTAATAMLRAGAPLAQVGQVLRHRRALTTETYAKVDRDALRALARPWPEARHD*