ggKbase home page

PLM2_5_b1_sep16_scaffold_55948_3

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: 1948..2868

Top 3 Functional Annotations

Value Algorithm Source
porphobilinogen deaminase (EC:2.5.1.61) similarity KEGG
DB: KEGG
  • Identity: 67.5
  • Coverage: 305.0
  • Bit_score: 384
  • Evalue 2.70e-104
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 305.0
  • Bit_score: 384
  • Evalue 1.30e-103
Porphobilinogen deaminase Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SHH5_GEOOG similarity UNIREF
DB: UNIREF100
  • Identity: 67.5
  • Coverage: 305.0
  • Bit_score: 384
  • Evalue 9.60e-104

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geodermatophilus obscurus → Geodermatophilus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 921
GTGACCGTCCTGCGCATCGGCACCCGGGGCAGCGCGCTGGCCCGGAGCCAGACCGCCACGGTCATCACCGCGCTGGCCGGCCTGGGGATCAAGGCCGAGCCGGTCGAGATCGTGACCACCGGCGACCGGTCGACCGCCGCGCTGACCCAGATCGGCGGCACCGGCGTATTCGTCTCGGCGCTGCGCGACGCGCTGCTCAGCGGCGAGATCGACGTCGCGGTGCACTCGTACAAGGATCTGCCGACGGCTCCGGAGCCGGGGCTGGTGGTGGCGGCCGTGCCGGAGCGCGAGGACCCGCGCGACGTGCTGGTGGCCCGGGACGGGTTCACCCTGGCCGAGCTGCCGGTCGGTGCCGTCGTCGGCACCGGGGCGCCCCGCCGGGCCGCGCAGATCCTCGCGCTCGGCCTCGGCGTCGAGGTCGTGCCGATCCGCGGCAACGTGGACACCCGGCTGCGCAAGGTGTCCTCCGGCGAGGTGGACGCGGTGGTGCTGGCCCGGGCCGGACTGTCCCGGCTGGACCGGCTGGACGCGGTGACCGAGACGCTCGATCCGCTGCTGGTGCTGCCCGCGCCCGCGCAGGGAGCGCTCGCGGTGGAGTGCCGCGCGTCCGACGGCGAGCTGGTGGCGCAGCTCGCCGCGCTCGACCACGCCGACTCCCGGGCCGCGGTCCTCGCCGAGCGCGCCCTGCTGGCCGGCCTTGAGGCCGGCTGCACCGCCCCGGTCGGTGCCCTCGCCGTGCTCGCCGAGGGCGAGCACGGTCCGGAACTGTTCCTCCGCGGCTCGGTGACCGCGGCCGACGGCTCCGATGCCGTCCGGCTGTCGGCCACCGGCCACGTCAACGACGCCGAGGCGATCGGCCGGCGGCTGGCCGCCGACCTGCTCGCCGACGGCGCCAAGAATCTCGTTGGGAGCACGCGATGA
PROTEIN sequence
Length: 307
VTVLRIGTRGSALARSQTATVITALAGLGIKAEPVEIVTTGDRSTAALTQIGGTGVFVSALRDALLSGEIDVAVHSYKDLPTAPEPGLVVAAVPEREDPRDVLVARDGFTLAELPVGAVVGTGAPRRAAQILALGLGVEVVPIRGNVDTRLRKVSSGEVDAVVLARAGLSRLDRLDAVTETLDPLLVLPAPAQGALAVECRASDGELVAQLAALDHADSRAAVLAERALLAGLEAGCTAPVGALAVLAEGEHGPELFLRGSVTAADGSDAVRLSATGHVNDAEAIGRRLAADLLADGAKNLVGSTR*