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PLM2_5_b1_sep16_scaffold_57583_4

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: comp(3047..3316)

Top 3 Functional Annotations

Value Algorithm Source
squalene synthase (EC:2.5.1.32) similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 84.0
  • Bit_score: 77
  • Evalue 1.20e-12
Squalene synthase HpnC {ECO:0000313|EMBL:AEH08662.1}; EC=2.5.1.32 {ECO:0000313|EMBL:AEH08662.1};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.6
  • Coverage: 84.0
  • Bit_score: 77
  • Evalue 6.00e-12
squalene synthase Tax=Frankia sp. BMG5.12 RepID=UPI000360D68E similarity UNIREF
DB: UNIREF100
  • Identity: 51.8
  • Coverage: 85.0
  • Bit_score: 80
  • Evalue 6.60e-13

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Taxonomy

Frankia symbiont of Datisca glomerata → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 270
GCCGCGCCGGCCTCCTCGCCCGCGGTCGGCCGGCTGCTCGCGTTCGAGACCGCGCGGGCCCGTGCGCTGCTGGTCGCCGGCTCGCCGATCGTCGGCACGCTGCGCGGCTGGGCCCGGGTCGCGGTGGCCGGCTACGTCGCCGGCGGGCTGGCCGCGGCCGACGCGCTCGCCCGCCCCGGCGCCGACCCGCTGGTGGCCACCCCGACCGCGTCGAGCGCCCGCACCGCGCGGCACGCGCTGGCCGTGCTGGTCCGGGGAAGGGCGGCATGA
PROTEIN sequence
Length: 90
AAPASSPAVGRLLAFETARARALLVAGSPIVGTLRGWARVAVAGYVAGGLAAADALARPGADPLVATPTASSARTARHALAVLVRGRAA*