ggKbase home page

PLM2_5_b1_sep16_scaffold_74462_1

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: comp(1..852)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2N1S0_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 51.7
  • Coverage: 296.0
  • Bit_score: 270
  • Evalue 1.90e-69
Putative LuxR family transcriptional regulator {ECO:0000313|EMBL:GAJ85760.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis NBRC 14402.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.0
  • Coverage: 271.0
  • Bit_score: 151
  • Evalue 1.40e-33
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 36.9
  • Coverage: 271.0
  • Bit_score: 146
  • Evalue 1.20e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nocardia brasiliensis → Nocardia → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 852
GTGGCTGCGACGGCTGCGACGCTCACCCGGGCCCGGGACGATCTCGTCCGGGTCGTCCACCGCTCGTCCGGACTTCCCGCGTTCGTCCGGGACGTGGGCCGCACGCTGCAGCGCGCGGTCCCGTTCGAGGGGGTGTGCCTGCTCACGGTCGATCCGGCGACGCTGTTGCCGACCAGGGAGATCGTGCAGAACGGGCTCCCGCCGTCGGCCCGGATCCGGCTGACCGAGATCGAGCTGGGGGAGGCGGACGTCAACAAGTTCGCCGCGCTCGCGAGCCGCCCCGTTCCGGCCGCCAGCCTCAGCGCGGCGACAAGGGGCGAGCTCGACCGCAGCCTCCGTCAGCGGGAGATCCGCCGCCCGAACGGCTTCGCCGACGAGCTGCGGGCCGTGCTCACCGGTCCCACCGGCAGCTGGGGCACGCTCACGCTGCTGCGCGAATCCCGTCGACCGCACTTCACCACCGCCGAGGTCGGTCTCGTCGCCGCGCTGGCCGCAACCCTGGCCGACGGCGTGCGCCGGGCGATGCTCGTCGACGGTGGGGTCGGCGACGGCCCGTCCGACACCGGAGTCCTGGTGCTCGCCGCCGACAACACGGTCGAGCTGGCCAACCCGGCCGCCGCGCGGTGGATGGAGGAGCTGTCCCCGCCTGGCCAGCCCGCCGCTGAGCTGCCGGTCGGGATCCGGGCCGTGGCCGCCCAGACCCGGCGGGTCGCCGCGGGCGACCGGAACGTGCTGGCCAGCGCCCGGATCAGGACCAGGGCCGGGCGCTGGGTGGTGGTCCGCGGCTCGCTCTCCGGCCCGGATCAGGTGGTCGTCCTGCTGGAGGCGGCCCGGCCGGCCGAGCTGGCCGAG
PROTEIN sequence
Length: 284
VAATAATLTRARDDLVRVVHRSSGLPAFVRDVGRTLQRAVPFEGVCLLTVDPATLLPTREIVQNGLPPSARIRLTEIELGEADVNKFAALASRPVPAASLSAATRGELDRSLRQREIRRPNGFADELRAVLTGPTGSWGTLTLLRESRRPHFTTAEVGLVAALAATLADGVRRAMLVDGGVGDGPSDTGVLVLAADNTVELANPAAARWMEELSPPGQPAAELPVGIRAVAAQTRRVAAGDRNVLASARIRTRAGRWVVVRGSLSGPDQVVVLLEAARPAELAE