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PLM2_5_b1_sep16_scaffold_72531_1

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: 1..834

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.3
  • Coverage: 284.0
  • Bit_score: 375
  • Evalue 3.30e-101
transcription-repair coupling factor Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI0003749ECF similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 281.0
  • Bit_score: 368
  • Evalue 3.80e-99
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 281.0
  • Bit_score: 365
  • Evalue 6.90e-99

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Taxonomy

Tetrasphaera australiensis → Tetrasphaera → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 834
GACATCAGCAACGCCAACACCCTCATCGTCGAGCGCTCCGACATGGTCGGCCTCTCCCAGCTGCACCAGCTGCGCGGACGGGTCGGCCGCGGCCGGGAGCGGGCCTACGCCTACTTCCTCTACCCGCCGGAGATGCCGCTGACCGAGACCGCGCTGGACCGGCTGCAGACGATCGCGGCCAACACCGAGCTCGGTGCCGGCATGCAGGTCGCGATGAAGGACCTGGAGATCCGTGGCGCCGGGAACCTGCTCGGCGGCGAGCAGTCCGGGCACATCGCCGGCGTCGGCTTCGACCTCTACGTCCGGCTGGTCGGGGAGGCGGTCGCGGACTTCCGTGGCGAGGCGCCGCAGGACGAGGTCGCCGACGTGAAGGTCGACCTTCCGGTGAACGCGCTGCTGCCGCACGACTACATCCCCGGCGAGCGGCTGCGGTTGGAGGCCTACCGCGCGCTGGCCGCGGCGGACTCCGACGAGGCGGTGGATGCGGTCCGCGACGAGCTGGCCGACCGCTACGGCCCGCCGCCGGAGCCGGTGGCGAACCTGCTTCAGGTGGCCCGGTTCCGGGTGTTCGCCCGCCGGTACGGCGTGACGGAGGTGTCGCTGCAGGGCTCGGTGGTGCGCTTCACGCCGCTGTCGCTGCGGGAGTCGCAGGAGATGCGGATGCACCGCCTCTACCCGCGCTCGGTGTGGAAGGGCTCGATCGGCACGATCTCGGTGCCGCGGCCGGGCAAGCCGGGTCAGCCGCTGCGGGACGTACCGCTGCTGGCTTGGGCGCGGACCGTGCTCTTCGACGTGCTCGGTGAGCCGGAGCCGGCGGTAGCGGCCGGTGCCTGA
PROTEIN sequence
Length: 278
DISNANTLIVERSDMVGLSQLHQLRGRVGRGRERAYAYFLYPPEMPLTETALDRLQTIAANTELGAGMQVAMKDLEIRGAGNLLGGEQSGHIAGVGFDLYVRLVGEAVADFRGEAPQDEVADVKVDLPVNALLPHDYIPGERLRLEAYRALAAADSDEAVDAVRDELADRYGPPPEPVANLLQVARFRVFARRYGVTEVSLQGSVVRFTPLSLRESQEMRMHRLYPRSVWKGSIGTISVPRPGKPGQPLRDVPLLAWARTVLFDVLGEPEPAVAAGA*