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PLM2_5_b1_sep16_scaffold_71915_5

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: 1822..2853

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 347.0
  • Bit_score: 579
  • Evalue 2.40e-162
DNA-directed RNA polymerase subunit alpha Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWB3_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 84.4
  • Coverage: 347.0
  • Bit_score: 579
  • Evalue 1.70e-162
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 347.0
  • Bit_score: 579
  • Evalue 4.90e-163

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1032
ATGCTGATCACTCAGCGCCCCACCCTGACCGAGGAGCAGATCTCCGAGTATCGCTCCCGGTTCACCATCGAGCCGCTCGAGCCCGGCTTCGGCTACACGCTGGGCAACTCGCTGCGCCGCACGCTGCTGTCCTCCATCCCGGGGGCGGCGGTCACCTCGCTGCGCATCGACGGCGTCCTGCACGAGTTCACCACCGTGCCGGGCGTCAAGGAGGACGTCACCGACCTCATCCTCAACCTCAAGGAGCTCGTCGTGAGCTCCGACGCGGACGAGCCGGTGACCATGTACCTGCGCAAGCAGGGGCCCGGTGAGGTCACCGCGGCGGACATCGCGCCGCCGGCCGGCGTCACCGTGCACAACCCCGACCTGCACCTGGCGACCATCAACAAGAAGGGCCGCCTGGAGATCGAGCTGGTCGTCGAGCGTGGCCGCGGGTACGTCCCGGCGACGCAGAACAAGCAGCCCGGGCAGGAGATCGGCCGCATCCCGGTGGACTCGATCTACTCGCCGGTGCTCAAGGTGACCTACCGGGTCGAGGCGACCCGGGTCGAGCAGCGCACCGACTTCGACAAGCTCGTCGTCGACGTCGAGACCAAGCCGTCGATCCTGCCGCGGGACGCGATGGCGTCGGCCGGCAAGACGCTGGTCGAGCTGTTCGGGCTGGCCCGCGAGCTCAACGTCGACGCCGAGGGCATCGAGGTCGGCCCGTCCCCGCAGGAGCAGGAGAACCTGGCCAACTTCTCGATGCCGATCGAGGAGATGGAGCTGACGGTCCGCTCGTACAACTGCCTCAAGCGGGAGGGCATCCACACCGTCGGCGAGCTGATCTCGCGCAGCGAGGCGGACCTGCTCGACATCCGCAACTTCGGGGCCAAGTCCATCGACGAGGTCAAGATGAAGCTCGCGCAGATGGGCCTGGCGCTCAAGGACAGCCCGCCCGGGTTCGACCCGTCGCACGTCGTGGACACCTACGGCACCGACGACTACGACAACGCCGGCGACTCGGACTACGCCGAGACCGAGCAGCTCTAA
PROTEIN sequence
Length: 344
MLITQRPTLTEEQISEYRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSLRIDGVLHEFTTVPGVKEDVTDLILNLKELVVSSDADEPVTMYLRKQGPGEVTAADIAPPAGVTVHNPDLHLATINKKGRLEIELVVERGRGYVPATQNKQPGQEIGRIPVDSIYSPVLKVTYRVEATRVEQRTDFDKLVVDVETKPSILPRDAMASAGKTLVELFGLARELNVDAEGIEVGPSPQEQENLANFSMPIEEMELTVRSYNCLKREGIHTVGELISRSEADLLDIRNFGAKSIDEVKMKLAQMGLALKDSPPGFDPSHVVDTYGTDDYDNAGDSDYAETEQL*