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PLM2_5_b1_sep16_scaffold_70947_3

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: 548..946

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Isoptericola.;" source="Isoptericola variabilis (strain 225).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 130.0
  • Bit_score: 110
  • Evalue 1.60e-21
Ribonuclease VapC Tax=Isoptericola variabilis (strain 225) RepID=F6FQ05_ISOV2 similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 130.0
  • Bit_score: 110
  • Evalue 1.10e-21
PilT protein domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 130.0
  • Bit_score: 110
  • Evalue 3.30e-22

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Taxonomy

Isoptericola variabilis → Isoptericola → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 399
ATGAGCATCTACCTGGACAGCTCGGCTCTGGTGAAGCTTGTCGTCGAAGAGCCGGAGTCCGAAGATCTCCGGACCTTCGTCGGCGACCGCGTCGTGGTCTCCTCAATGGTCGCGCGGACGGAGGTGATACGGGTTGTGGCCCGGACTGAGCCCGAGCGGGTGGGCGCCGCCGAGAAGGTGCTCGCCGAGACGTCGCTGATCATCATCGACGGGCCGCTGGCGTCGGCCGCGGCGTGGGTCGAGCCTGCCAGCATCCGATCCCTCGATGCGATCCACCTCGCGACGGCCCAGCGGTTGGAGGTCGGTCTGGAGGCTTTGGTGACGTATGACCGGCGGATGGTGGACGCAGCGCAGATGGCCGGGCTGCGGGTGGCGTCCCCGGGAGACAAGTCCGCGTGA
PROTEIN sequence
Length: 133
MSIYLDSSALVKLVVEEPESEDLRTFVGDRVVVSSMVARTEVIRVVARTEPERVGAAEKVLAETSLIIIDGPLASAAAWVEPASIRSLDAIHLATAQRLEVGLEALVTYDRRMVDAAQMAGLRVASPGDKSA*