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PLM2_5_b1_sep16_scaffold_1317_14

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: comp(10924..11661)

Top 3 Functional Annotations

Value Algorithm Source
truA; tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 89.8
  • Coverage: 245.0
  • Bit_score: 455
  • Evalue 7.60e-126
tRNA pseudouridine synthase A {ECO:0000255|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000255|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000255|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000255|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000255|HAMAP-Rule:MF_00171}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 245.0
  • Bit_score: 455
  • Evalue 3.80e-125
tRNA pseudouridine synthase A Tax=Rhodopseudomonas palustris (strain BisB18) RepID=TRUA_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 89.8
  • Coverage: 245.0
  • Bit_score: 455
  • Evalue 2.70e-125

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGCCCCGCTACAAGCTGACCATCGAATATGACGGCGCGCCGTTCTGCGGCTGGCAGATCCAGGACAATGGCGCCTCGGTGCAGGGCGCGCTGGAAGACGCGGTCAAGGCGATCTGCGGCGAGCATGTTCGCGTTCACGGCGCGGGCCGCACCGACGCCGGCGTGCATGCGCTGGCGCAGGTCGCGCATTGCGATATTGCAAAGCATTTCGTGCCGGGGCGCTTTCGCGACGGCCTCAATGCGCATCTGCGGCCGCATCCGATCGGCGTGCTTTCGGCGGAAATCGTGCCCGATACGTTCGAGGCGCGGTTTTCGGCGAAGCGGCGGCATTATCTCTATCGCATCAGTAATCGCCGCGCCAATCTCGCGCTCGACATCGGCCGTGTCTGGCGGCTGCCGAGGCCGCTCGATACCGATGCGATGCATGCCGCCGCGCAGCGACTGGTCGGCAAGCACGACTTCACCACGTTTCGCGACACCGAATGCCAGGCGAAGTCGCCGGAAAAAAACCTCGACCAGCTCGACGTGGTCAGGGACGGCGACGCCGTCAACATCGTGACCTCGGCGCGCTCGTTCCTGCACAGCCAGGTGCGCTCGATGGTCGGCTCGCTGGTCTGGGTCGGCGAGGGCCGCTGGAGCGCCGACGATCTTGCCGCCGCCCTGGCCGCCAGAAACCGCACCGCCTGCGGCCCGGTCGCACCACCCGATGGACTCTATCTGGTACGCGTGGATTATTAG
PROTEIN sequence
Length: 246
MPRYKLTIEYDGAPFCGWQIQDNGASVQGALEDAVKAICGEHVRVHGAGRTDAGVHALAQVAHCDIAKHFVPGRFRDGLNAHLRPHPIGVLSAEIVPDTFEARFSAKRRHYLYRISNRRANLALDIGRVWRLPRPLDTDAMHAAAQRLVGKHDFTTFRDTECQAKSPEKNLDQLDVVRDGDAVNIVTSARSFLHSQVRSMVGSLVWVGEGRWSADDLAAALAARNRTACGPVAPPDGLYLVRVDY*