ggKbase home page

PLM2_5_b1_sep16_scaffold_5813_10

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: comp(8524..8916)

Top 3 Functional Annotations

Value Algorithm Source
Putative YtrA (Transcriptional regulator YtrA) Tax=Bradyrhizobium sp. STM 3809 RepID=H0SXN9_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 124.0
  • Bit_score: 171
  • Evalue 4.10e-40
Putative YtrA (Transcriptional regulator YtrA) {ECO:0000313|EMBL:CCD98966.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.2
  • Coverage: 124.0
  • Bit_score: 171
  • Evalue 5.80e-40
YtrA (transcriptional regulator YtrA) similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 130.0
  • Bit_score: 104
  • Evalue 1.80e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium sp. STM 3809 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 393
ATGCATACAGACCTACTCAAAACCCTTTGCCTCGAAAGCTCGGGCGTCCCCATTTACGTGCAGCTTCGAGAGCAAATCTTGCGGCAGCTTGGCGCTGGCGTGCTGTCAACCGGTGACCAGATGCCGACGATGCGCGAAGTGGCGGTCACTTTGAAAATCGACCTCAATACGGTTCGGCACGCTTACGACGAACTTGAGCGGATGGGCGCCATCACGCTGGTTCGAGGACGCGGCAGCTTCGTAGCTGAACCGCCTCCCGCCATGGGAGCGCGCGCGCAAAATATCAAGGCCGACAGTTTGGCAAAACAGGTTCTAGCCACAGCCGCCGCGATGGGCCTCGACCCTGCCGTCGTTGCTGACCGAATAAAGGCCCTCGCAAAGCAGAAGGAATAG
PROTEIN sequence
Length: 131
MHTDLLKTLCLESSGVPIYVQLREQILRQLGAGVLSTGDQMPTMREVAVTLKIDLNTVRHAYDELERMGAITLVRGRGSFVAEPPPAMGARAQNIKADSLAKQVLATAAAMGLDPAVVADRIKALAKQKE*