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PLM2_5_b1_sep16_scaffold_4946_5

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: 2759..3316

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor Tax=Afipia clevelandensis ATCC 49720 RepID=K8NN76_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 184.0
  • Bit_score: 241
  • Evalue 3.50e-61
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EKS31772.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.4
  • Coverage: 184.0
  • Bit_score: 241
  • Evalue 5.00e-61
SigD; RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 64.7
  • Coverage: 184.0
  • Bit_score: 228
  • Evalue 1.10e-57

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGTGGGCGCCCGAGGCCGAGCTGAAGAATCTGATGCTCGCGGGCCTCGACGGCGACGCGGCGGCTCATCGCTCGCTGCTGACGTCCTTGAGCAACTACCTGCGCGCCTACTACAGGCGGCAACTCGGGCGCATTGGAAGAAGTGCGACGGACGCGGAGGATCTGGTGCAAGAGGCGTTGTTGGCGATCCATACTCGCCGTCATACATACGACCCCGTCGAGCCCCTGACTCCGTGGGTACACGCGATTGCGCGCTACAAGCTCATCGACCACCTGCGGCGCACGCGGACATCGCTACGCGACGTACCGATCGACGAGGCCCCCGATCTGATCGCGGAGGGGGATCATAATGATACGGAAAGCACTCATGATCTTGGCAAGCTTCTCGGCCAACTGCCGGAAAAGACGCGGCGGGTCATCGAATGCGTCAAGCTTGAGGGGTTGAGCGTCGCCGAAACCGCCGCCCGTTGTGGTTTGTCGGAATCGAATGTGAAGGTAAGCGTGCATCGGGGCTTGCGGGCGCTGGCCGCCGCAATCGCGCGGGAGCGACAGCAATGA
PROTEIN sequence
Length: 186
MWAPEAELKNLMLAGLDGDAAAHRSLLTSLSNYLRAYYRRQLGRIGRSATDAEDLVQEALLAIHTRRHTYDPVEPLTPWVHAIARYKLIDHLRRTRTSLRDVPIDEAPDLIAEGDHNDTESTHDLGKLLGQLPEKTRRVIECVKLEGLSVAETAARCGLSESNVKVSVHRGLRALAAAIARERQQ*