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PLM2_5_b1_sep16_scaffold_6751_7

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: comp(6461..7585)

Top 3 Functional Annotations

Value Algorithm Source
Branched-chain amino acid transport system substrate-binding protein Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IM46_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 373.0
  • Bit_score: 536
  • Evalue 1.80e-149
N-acetylmuramoyl-L-alanine amidase AmiC {ECO:0000313|EMBL:KJC61257.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.2
  • Coverage: 373.0
  • Bit_score: 537
  • Evalue 8.90e-150
putative aliphatic amidase expression-regulating protein, AmiC similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 373.0
  • Bit_score: 531
  • Evalue 1.70e-148

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Taxonomy

Bradyrhizobium sp. LTSPM299 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1125
ATGATGGCGGGCGAGATGCGCAAGAGCGCGTTGATGGCCATCGATGAGGTCAATCGCAGCGACGAGTTCGATTTCACATTCGCACCGCACCTGCGCGATCCTGGCGGGGTTGTCGCTGCTTATCACACCGCATGCGATGATTTAATTCGCGAGGAACAGGTCGACCATATCGTCGGCTGTTATACATCGGCGTCGCGCAAGCAGGTCATTCCCATTGTCGAACGCACCGAGCGGCTGCTCTGGCATCCGGCGCGATACGAAGGCTTCGAAAGCAGCGATAACGTTATCTATGTCGGCGCCGCGCCGAACCATACCGTGGTGCCGCTGGTGCGCCATATGCTCGACCACATCTCCAGCGACGTATTCTGTGCCGGCTCCAATTATGTCTGGACCTGGGAAACCAATCGGGTGCTGCGTGAAATCGTGACCAGCGCCGGCGGCCACATCCTTGCCGAACGCCTGCTGGAGCTCGGCGAAACCGCGGTGGACCATATCGTCAAGGAAATCGTCGACAGAAAACCGCCCGTCGTGTTCAACACGCTGGTCGGAGAATCCAGTTACGTCTTCATGCGATTGCTTCATGCCGCGACGCTGCGCTCGGGATTGACGATTCCCGTACTGAGCTGCAGCCTGTGCGAGCCCGAGCTCAAGCTGATCGGATCGGCGGCCACGGCCGGATGCATCACCTCATCTGCTTATTTCGAGAGCATCGCGCGGCCCGAAAATAGCGCTTTTGTAGCGCGGTGGAAGGCCCGTCACGGCGACGACAGCCAGCCCTGCGTCGACGGGCTGTCGACATATGTCTGCGTCATGCTGCTCGCCCGCGCCATCCGCCGCGCCGGTTCGGTGGAGGTCGGCGCCGTCCGGCGCGCTGCGGCAAATCATCGCTATGAATCCCCGCAAGGCCCGGTTTGGGTCGATCCCGACAATAATCACTGCTTCCTGACCCCCCGTTTGGCACGCGCTGAGCCCGGATGGCAGTTCAAGATCTTCTGGGAAGCGGATGCCCCCGAGCGCCCCGACCCGTATCTTTCGAACCTCGATCTGGCAGCGGTTGGCACGAGGCTTGAAAGGAGCAATGATGCAATGACGAAGCGGTCAAACCACCTGCGTATCGTGAAATGA
PROTEIN sequence
Length: 375
MMAGEMRKSALMAIDEVNRSDEFDFTFAPHLRDPGGVVAAYHTACDDLIREEQVDHIVGCYTSASRKQVIPIVERTERLLWHPARYEGFESSDNVIYVGAAPNHTVVPLVRHMLDHISSDVFCAGSNYVWTWETNRVLREIVTSAGGHILAERLLELGETAVDHIVKEIVDRKPPVVFNTLVGESSYVFMRLLHAATLRSGLTIPVLSCSLCEPELKLIGSAATAGCITSSAYFESIARPENSAFVARWKARHGDDSQPCVDGLSTYVCVMLLARAIRRAGSVEVGAVRRAAANHRYESPQGPVWVDPDNNHCFLTPRLARAEPGWQFKIFWEADAPERPDPYLSNLDLAAVGTRLERSNDAMTKRSNHLRIVK*