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PLM2_5_b1_sep16_scaffold_8234_15

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: comp(6117..6416)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L23 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=RL23_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 94.9
  • Coverage: 99.0
  • Bit_score: 188
  • Evalue 2.50e-45
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.0
  • Coverage: 99.0
  • Bit_score: 189
  • Evalue 1.60e-45
rplW; 50S ribosomal protein L23 similarity KEGG
DB: KEGG
  • Identity: 94.9
  • Coverage: 99.0
  • Bit_score: 188
  • Evalue 7.00e-46

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGAAGAATATCGATCCGCGCCATTACGACATCATCGTTTCTCCGGTCGTGACCGAAAAGGCGACCGTCGCCTCCGAGCACAACAAGGTGGTGTTCAGGGTGGCGAGCAAGGCAACCAAGCCGCAAATCAAGGAAGCCGTCGAGAAGCTGTTCGACGTCAAGGTGAAGAGCGTGAACACGCTGGTGCGTAAGGGCAAGACCAAGGTCTTCCGCGGCCAGTTCGGTTCCCAGTCGGATGTGAAGCGTGCGATCGTGACCCTCGAAGAGGGCCACCGCATCGACGTCACCACCGGGCTATAA
PROTEIN sequence
Length: 100
MKNIDPRHYDIIVSPVVTEKATVASEHNKVVFRVASKATKPQIKEAVEKLFDVKVKSVNTLVRKGKTKVFRGQFGSQSDVKRAIVTLEEGHRIDVTTGL*