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PLM2_5_b1_sep16_scaffold_11878_3

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: 3004..4395

Top 3 Functional Annotations

Value Algorithm Source
Type I secretion membrane fusion protein, HlyD Tax=Magnetospirillum gryphiswaldense RepID=A4TWW1_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 35.7
  • Coverage: 459.0
  • Bit_score: 285
  • Evalue 7.00e-74
HlyD family secretion protein {ECO:0000313|EMBL:CDO58985.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.2
  • Coverage: 439.0
  • Bit_score: 315
  • Evalue 6.80e-83
conserved protein of unknown function(Type I secretion membrane fusion protein, HlyD) similarity KEGG
DB: KEGG
  • Identity: 35.7
  • Coverage: 459.0
  • Bit_score: 285
  • Evalue 2.00e-74

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Taxonomy

Candidatus Phaeomarinobacter ectocarpi → Candidatus Phaeomarinobacter → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1392
ATGTCGATTTGCGTTCCGCCCGAGGACCTAGATACCTTGTCGCCACCATCTGGCAGGCGAGTGGAAATTGCGCGACGGCTTACCCGACCGCTCGTGCTGGAGGACGGCCGGCCACCTCGTTTACTGGTCGCGACACTGCTGACTGCTTCCGGTTTTGTCATGGCTGCAATTGTCTGGGGTGCCTTGACGCAGGTTCGCGAGGTTACCGTCGCACAGGGCCAGATAATCCCGCGCGGCCAGGTTCAGAATGTTCAACATCTTGAAGGTGGCATAGTCGCCGAGATTTTTGTTCATGAGGGCATGATTGTAGCCGCCCAACAACCCCTGATCAGACTGCGGCCGGAAGCGGCAGTCAGTGATCGCGACCAGTATGAAGCTCGCCGTGCGAATCTGAAACTTCAACTTATCCGGATTGAGGCCCAAAGCCGTGACGAGATACCGGACTTCGGCGGTCTGACTAAGGACTTTCCTGACCTGACTGCGCAACAGGAAAAACTGTACGTTAGCTCCGTTATTCAGCGACGCCACGAGCGCGCAACCCTTGAAGCCAAGGCGGCTCAGAAGCGCAGCGAGATCGCAACGCTGAATTCAGGTTTGGAATCTGCGCGGGCGCAAGTTGAAGTTCAGCAGGAATTGGTTGCGCTACAAGACGGCCTTCAACGAGCGGGCCTTGGCGCTCGTAAGAGCTGGCTCGAAGCAAAATATGTCTTGCAACGTGCCGAAGGTGAAATCCCGAATTTTGAAGGTAAGCTCGTTTCGGCGAGGGATGCTGTCATAGAAGCTGAAAGCAGCTTGGCGGAAGCCGATGCCAAGGCTATGCAGAAGCTAAGCGAGGAGCGGGTAAAGGCGGCCTCCGAACTGGCGGAGACCGAACAGCAATTGGTCAAACTTGCCGACCGTTTTGAGCGACTTTTAGTGCGCGCTCCCTCAGATGGAATTGTTCAGGAACTAACCCCGAAATCCGTCGGGGAGGTCGTCAAGGCTGGCGATCCGGTGGCTCGGATAGTTCCCACCGCCCGTGAATTGGTAGCCGAGGTACGAATCGATCCCAAGGACTCCGGTCACATTCATTCGGATGCAGACGCGGAGATTCGGCTCCTGACCTTCGACAGCGCGATATTTGGCTCAGTTCGCGGCAAGGTGGAATTCGTGTCGGCGACTACCTTCAATCCGCCGCCGGGACAGGCCACGCCGGGTCAGAATAGTAGCGAGCCTTATTACAAAGCCACTGTTCGTCTGCTGCAGGACCATGTGAGTTCTGGCGCAACCAATTATCCGATTGCGCCTGGAATGGTCCTGCAAGCCCACATCCAAACCGGTTCAAAATCTATTATTCGGTACATGTTCAAACCCGTATTCAACTCGTTGGACGTTGCCTTCACCGAGCGGTAG
PROTEIN sequence
Length: 464
MSICVPPEDLDTLSPPSGRRVEIARRLTRPLVLEDGRPPRLLVATLLTASGFVMAAIVWGALTQVREVTVAQGQIIPRGQVQNVQHLEGGIVAEIFVHEGMIVAAQQPLIRLRPEAAVSDRDQYEARRANLKLQLIRIEAQSRDEIPDFGGLTKDFPDLTAQQEKLYVSSVIQRRHERATLEAKAAQKRSEIATLNSGLESARAQVEVQQELVALQDGLQRAGLGARKSWLEAKYVLQRAEGEIPNFEGKLVSARDAVIEAESSLAEADAKAMQKLSEERVKAASELAETEQQLVKLADRFERLLVRAPSDGIVQELTPKSVGEVVKAGDPVARIVPTARELVAEVRIDPKDSGHIHSDADAEIRLLTFDSAIFGSVRGKVEFVSATTFNPPPGQATPGQNSSEPYYKATVRLLQDHVSSGATNYPIAPGMVLQAHIQTGSKSIIRYMFKPVFNSLDVAFTER*