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PLM2_5_b1_sep16_scaffold_12185_1

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: comp(2..619)

Top 3 Functional Annotations

Value Algorithm Source
Tetracycline resistance protein Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89MY8_BRADU similarity UNIREF
DB: UNIREF100
  • Identity: 81.7
  • Coverage: 164.0
  • Bit_score: 280
  • Evalue 1.00e-72
MFS transporter {ECO:0000313|EMBL:KIZ44179.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 167.0
  • Bit_score: 283
  • Evalue 1.30e-73
tetA; tetracycline resistance protein similarity KEGG
DB: KEGG
  • Identity: 81.7
  • Coverage: 164.0
  • Bit_score: 280
  • Evalue 2.80e-73

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
GTGGAGTTGATCCTGCCGATCCTGCCCAAGCTCGTGGAAAGTTTTGTCGACAACGACACCGCGAGCGCCGCGCGGATCTTCGGTCTGTTCGGTACCGCCTGGGCGGTGATGCAATTTTTCTTCTCGCCGGTCCTGGGCGGCCTGTCGGACCAGTTCGGCCGGCGGCCGGTGGTGCTGCTGTCGAATCTGGGGCTCGCGCTCGATTATGTGCTGATGGCGCTGGCGCCGTCCTTGACCTGGCTTTTCGTCGGCCGAGTGATCTCGGGGATTACCTCGGCAAGTGTTTCGACGGCATTCGCCTACATCGCGGATGTGACGCCTGCCGAACAGCGCGCAGCGGTGTTCGGCAAGGTCGGCGTTGCGTTCGGCGCTGGTTTCATTCTCGGACCGGCGGTCGGCGGACTGCTCGGCGGCATGGATCCGCGGTTGCCGTTCTGGGTCGCGGCGGGCCTGAGCTTTGCCAACACGCTTTACGGCTTGTTGATCCTGCCGATCCTGCCCAAGCTCGTGGAAAGTTTTGTCGACAACGACACCGCGAGCGCCGCGCGGATCTTCGGTCTGTTCGGTACCGCCTGGGCGGTGATGCAATTTTTCTTCTCGCCGGTCCTGGGCGGCCTG
PROTEIN sequence
Length: 206
VELILPILPKLVESFVDNDTASAARIFGLFGTAWAVMQFFFSPVLGGLSDQFGRRPVVLLSNLGLALDYVLMALAPSLTWLFVGRVISGITSASVSTAFAYIADVTPAEQRAAVFGKVGVAFGAGFILGPAVGGLLGGMDPRLPFWVAAGLSFANTLYGLLILPILPKLVESFVDNDTASAARIFGLFGTAWAVMQFFFSPVLGGL