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PLM2_5_b1_sep16_scaffold_6516_1

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: 41..496

Top 3 Functional Annotations

Value Algorithm Source
fucose binding protein Tax=Kaistia granuli RepID=UPI0003639F29 similarity UNIREF
DB: UNIREF100
  • Identity: 81.3
  • Coverage: 150.0
  • Bit_score: 246
  • Evalue 1.50e-62
rbsd or fucu transport similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 150.0
  • Bit_score: 233
  • Evalue 3.80e-59
RbsD or FucU transport {ECO:0000313|EMBL:ADU35301.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 150.0
  • Bit_score: 233
  • Evalue 1.90e-58

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 456
ATGTTGAAATCGATCGATCCAATTCTCGGCGCGGACGTGCTTTATGCGTTGCGCGCCATGGGCCACGGCGATGAACTCGTTATCTGTGACATGAATTTCCCGGCCGACGCGGTCGCTCGTCAGACCGTGCTTAAGCGGCTCCTCCATATCGACAACGTAACCGCTGGCCGGGCGGCGCGCGCTATCCTTTCAGTCCTGCCACTCGATTCCTTTGTCGACAAGCCCGCTTTGCGAATGGAAATCGTCGGCAAGCCCGATGAGGTTCCACCCGTGCAGATCGAGGTGCAGACCGAGATCGACGCTGCGCAGGGCCGCCCTTCGCCAATGGGTTCGATCGAGCGATTTGCCTTCTATGAACTCGCGAAGAAATCCTATTGCGTGATACAGACCGGCGAACGTCGCTTCTATGGCTGCTTCATCTTCAAGAAAGGTGTCATTGCGCCCGACGCGGCTTAG
PROTEIN sequence
Length: 152
MLKSIDPILGADVLYALRAMGHGDELVICDMNFPADAVARQTVLKRLLHIDNVTAGRAARAILSVLPLDSFVDKPALRMEIVGKPDEVPPVQIEVQTEIDAAQGRPSPMGSIERFAFYELAKKSYCVIQTGERRFYGCFIFKKGVIAPDAA*