ggKbase home page

PLM2_5_b1_sep16_scaffold_6580_4

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: comp(1226..2137)

Top 3 Functional Annotations

Value Algorithm Source
iolE; inosose dehydratase (EC:4.2.1.44) similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 297.0
  • Bit_score: 483
  • Evalue 3.20e-134
Xylose isomerase Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FN90_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 301.0
  • Bit_score: 498
  • Evalue 2.60e-138
Xylose isomerase {ECO:0000313|EMBL:ESX80590.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 301.0
  • Bit_score: 498
  • Evalue 3.70e-138

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. LSHC420B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGAAGGCAAAATTGGGTATCGCTCCGATTGCATGGTGGAATGACGACCTCGAGGAACTGAGCGACGACGTTTCGCTCGAAGAATGTCTGCGTCAGGCGAGTGAGGCAGGTTTCACCGGCATGGAGACAGGCCGCCGTTTTCCGATGGATGCGAAAGTGCTTGGTCCGATCCTGAGAGCCCACAAAATGAGCGTCTGCGGCGGCTGGTTCTCCGGCCTGTTGCTTGACGGCGACCTGGAAGAGGAAAAGCAGCGCATTGCCGAGCAAATGGCGTTGTTCAAAGCCGTCAATGCGCCCTGCATCGTTTACGGCGAATGCGCACGCACCATTCAAGGCGACCGTTCGAAGCCTCTGGCCACGAAGCCAAAACTTTCAGAGGACGAAATCAAGGTCTATGCCCGCAAGATGACGAAGTTCGGCGAATGGTGCGCCGAGCAGGGCATGCCCCTGTCCTATCACCACCATATGGCCGCCGTGATCGAGACAGAGCCAGAGCTCGACATGTTCATGAAACACTCGGGCGAAGGCATCCCGCTGGTTTTTGATGCGGGCCACATGGCTTTTGCGGGCGGCGATGTCATGCGCGTCATCGACAAGCACCACAAGCGCATCACGCATGTTCACACCAAAGATGTGCGCATGGATGTTATCGACAAGCTTGACCGCACCAGAGAGAGTTTTCTTGACGCGGTCGTAAAGGGCGCCTTCACCGTGCCTGGCGACGGCTCGCTCGATTTTGACGCTATACTCAAGAGGCTCGCCGAATATGGCTATGAGGGTTGGTTTGTGGTCGAGGCTGAACAAGATCCTGTAAAGGCGCCTCCGGCCGAATACGCCAAGATTGGTTACCGCGCCTTGACCAAGGCGCTTGCTAAGGCAGGTTACAAACTCGAAGGGCAATCGTATGAATAG
PROTEIN sequence
Length: 304
MKAKLGIAPIAWWNDDLEELSDDVSLEECLRQASEAGFTGMETGRRFPMDAKVLGPILRAHKMSVCGGWFSGLLLDGDLEEEKQRIAEQMALFKAVNAPCIVYGECARTIQGDRSKPLATKPKLSEDEIKVYARKMTKFGEWCAEQGMPLSYHHHMAAVIETEPELDMFMKHSGEGIPLVFDAGHMAFAGGDVMRVIDKHHKRITHVHTKDVRMDVIDKLDRTRESFLDAVVKGAFTVPGDGSLDFDAILKRLAEYGYEGWFVVEAEQDPVKAPPAEYAKIGYRALTKALAKAGYKLEGQSYE*