ggKbase home page

PLM2_5_b1_sep16_scaffold_6590_4

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: 3896..5119

Top 3 Functional Annotations

Value Algorithm Source
ABC-type branched-chain amino acid transport system, periplasmic component Tax=Burkholderia sp. BT03 RepID=J2IJH2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 74.3
  • Coverage: 408.0
  • Bit_score: 625
  • Evalue 3.30e-176
Urea ABC transporter, urea binding protein {ECO:0000313|EMBL:ETY80249.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 408.0
  • Bit_score: 627
  • Evalue 1.20e-176
putative ABC transporter, branched-chain amino acid-binding protein similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 408.0
  • Bit_score: 608
  • Evalue 1.20e-171

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Burkholderia caribensis → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1224
ATGAAAGTCAATCGCAGAAGGTTCTTACAGGGCACGGCCGCTGCTGCTGCCACGGGCGCGTTCGGGTCCAGCGCCTGGGCGGAAGACCCGATCAACGTGGCCAGCATTCACGATCTCTCGGGTGGTCTCGACATCTACGGCAAGCCGATGGTCGATGCGATTACGCTCGCCGTCGAGGAAGCCAACGCGGCCGGCGGTCTTCTCGGCCGGCAGATCAAATTGATCAACTACGATACGCAGTCGAACATGCAGCTCTATACGCAGTTTGCGCAGCAGGCGGCGTTGAAGGACAAGGTCGCCGTCGTGCATGGCGGCATCACCTCCGCCTCGCGCGAGGTGATCCGGCCGGTGCTCGATCGCTTCAAGACGCTGTATTTCTACAATACGCAATACGAGGGTGGCGTCTGCGACCGCAACCAGTTCGACACCGGAGTGACGCCGGCGCAAACCGTCGAGAAGCTGGTGCCTTATGCCATGAAGAAGTGGGGCAAGAAGGTCTATGTCATCGCGGCCGACTACAATTACGGCCAAATCACCTCGCAATGGGTGAAGAAATACGTCACCGAAAACGGCGGTGAAGTTCCGTCGATCGACTTCTTCCCGCTCGATGTTACGAATTTCGGCTCGACCATCTCCAAGATCCAGGCGGCAAAACCGGATTTCGTATGGTCAGCGCTGGTCGGCGGCGCGCACATATCCTTCTACCGCCAGTGGGCCGCGGCCGGTATGCGCAAGAGCATTCCGATGGCGTCGACCACCTTCGCCGTGGGTAACGAGCACATCGTGCTGTCGCCTGACGAATGCAACGGCATGCTGGTCTGCTACAACTACTTCCAGGATTTGAAGAACAAAGCCAACGAAACTTTTGTTGCAGCTTTCCACAAACGTTTTGGCGCCGACTATCCCAACGTCACCGAACTCGCGATGGGAACCTATCAAGGCTTCCGTATCTGGGCGGAGGCGGTCAAGAAAGCCGGCAGTGTTGACCGCATCAAAGTCATCGAAGCGCTGGAAACTGGAATCAGCATCGACGCCCCGTCGGGCAAGGTCACGATCGATCCCCCGACCCACCATTGCGTGCTCGATGTTCACATCGCCGAAGTCAAGGACAAGAAGCTCAACGTGCTGGAAGACTTCGCCCAGCAGAAACCGGCGGACACCGCCGCGGTCTGCGATCTTATCAAGAACCCGACCGACAACCAGCAATACGTGATCAAGATCTGA
PROTEIN sequence
Length: 408
MKVNRRRFLQGTAAAAATGAFGSSAWAEDPINVASIHDLSGGLDIYGKPMVDAITLAVEEANAAGGLLGRQIKLINYDTQSNMQLYTQFAQQAALKDKVAVVHGGITSASREVIRPVLDRFKTLYFYNTQYEGGVCDRNQFDTGVTPAQTVEKLVPYAMKKWGKKVYVIAADYNYGQITSQWVKKYVTENGGEVPSIDFFPLDVTNFGSTISKIQAAKPDFVWSALVGGAHISFYRQWAAAGMRKSIPMASTTFAVGNEHIVLSPDECNGMLVCYNYFQDLKNKANETFVAAFHKRFGADYPNVTELAMGTYQGFRIWAEAVKKAGSVDRIKVIEALETGISIDAPSGKVTIDPPTHHCVLDVHIAEVKDKKLNVLEDFAQQKPADTAAVCDLIKNPTDNQQYVIKI*