ggKbase home page

PLM2_5_b1_sep16_scaffold_18045_4

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: comp(2640..4565)

Top 3 Functional Annotations

Value Algorithm Source
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 651.0
  • Bit_score: 956
  • Evalue 1.00e-275
methionyl-tRNA synthetase Tax=Bradyrhizobium japonicum RepID=UPI000372E153 similarity UNIREF
DB: UNIREF100
  • Identity: 75.5
  • Coverage: 656.0
  • Bit_score: 966
  • Evalue 7.20e-279
metG; methionyl-tRNA synthetase similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 664.0
  • Bit_score: 944
  • Evalue 1.10e-272

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1926
GTGGCGACGGCTAAGAAAAAAACTGCCAAGACGCGCGGCGCGAAAAAGGCCCGCAAATCGCCGAGCGCCCGCACCGCTGCGGCAGCGTCAAAAGTGCGCGCCAAGACCGGCAAGCGCCCGGTGAAGAAGGCCAAGAAAGCCGCCAAGAAAAAAGCAAAGAAAACCGTAAAGAAAACCGTAAAGAAAACGGCTGCGAAGAAGGCTCCCAAAAAGCCGTCCAGGACGCCGACCAAGAAATCATCGAAAGGCAGTCCGAACAAACCTATCGCGACAGCGAACGAGACCAGCGTTGCCGAAAAGACGTTATCGGCTGGCACAAGCGCAAAGGTCGGCACTCCGAAAAAGAAAGCCGCTCGCATCGCAAACCCGTCGACGCCGGCGGAACGAAAGTCCTTCTACATCACAACCGCGATCGCGTACCCGAACGGCGTGCCGCACATCGGCCACGCCTACGAGGCGATCGCGACCGATGCGCTGGCGCGCTTTCAGCGACTCGACGGCAAGGACGTGTTCTTTCTCACCGGAACCGACGAGCACGGCCTGAAGATGATCCAGACCGCGGAAGCCGAAAAGCTGCCGACGCTGGAAGTCGCGACGCGCAACGCCCTCAGGTTCAAGGAGATGGACCAGCGTCTGAACGTCTCGTTCGACCGTTTCATCCGCACCACGGAAGAACAACATCATCGCTCCAGCCAGGCGATCTGGCAGCGGATGGCCGACAATGGCGACATCTATCTGGATAGCTACGCGGGCTGGTACTCGGTGCGCGAGGAAGCCTATTATGCCGAGGACGAAACCGTCGTCGGCGATGACGAGGTTCGGCGCGGACCGCAGGGCTCGCCCGTCGAATGGGTCGAGGAGAAGAGTTATTTCTTCAAATTGTCCGCCTATCAGGACAAGCTTCTGGCTCTCTATGACAACCAACCGGATTTCATCGGCCCGGACTCGCGCAGGAACGAGGTTGTCAGCTTCGTCAAAAGCGGATTGCGCGACCTGTCGATTTCACGAACCACGTTCGACTGGGGCGTCAAGGTTCCCGGAGATCCCGAGCACGTCATGTATGTGTGGGTCGATGCCTTGACCAATTACATCACCGGCGTCGGCTTTCCCGATGAGAGCGACGCGAACTGGCGCTACTGGCCAGCGGATGTGCATATCATCGGCAAGGACATCATCCGTTTTCACGCGGTGTACTGGCCGGCGTTCCTGATGTCGGCGGGCATTCCGCTGCAGAACCGCGTCTACGCCCATGGCTTTCTGTTCAACAAGGGCGAGAAGATGTCGAAGTCGGTCGGCAACGTCGTCGATCCCTTCAACCTCGCCAATCAATACGGCGTCGATCAGATGCGCTACTTCTTCCTGCGCGAGGTGCCGTTCGGGCAGGACGGCAGCTATAATCACGAAGCCATTGTTGCGCGCATCAATGCCGACCTCGCCAATGATCTCGGCAATCTGGCGCAACGCTCGCTGTCGATGATCGCAAAACAGCATGAGGGCGTGTTGCCCGAGCCCGGCGCCTTCAGCGACACCGACAAGGCGATCCTGGCGCAGGCCGATGGCATGATCACGCTTGCACGAACGGCGATGGCGACACAGCAGATCCATCATTGGCTGAATGCGGTCTGGGCCGTTGTGGCGGAAGCCAACCGCTATTTCGCCGGCGAGGCGCCGTGGGCATTGGCAAAAACAGATCCGCAGCGCCAGCGAACTGTGTTGTATGTGACCGCCGAAGTGGTCCGTCAGGTCGCCATTCTGGCGCAACCGGCGATGCCCGATTGCTCGGCAAGGCTGCTTGACATCCTCGGCATTCCGGCCGATCAGCGCGATTTCGCAGGCTTGGGCGGCGCTGCCCGCATCAAGCCAGGGGCCGCGCTGCCCGCGCCAACCGGAATTTTTCCGCGCTATATCGAACCGACCGCTGCCTGA
PROTEIN sequence
Length: 642
VATAKKKTAKTRGAKKARKSPSARTAAAASKVRAKTGKRPVKKAKKAAKKKAKKTVKKTVKKTAAKKAPKKPSRTPTKKSSKGSPNKPIATANETSVAEKTLSAGTSAKVGTPKKKAARIANPSTPAERKSFYITTAIAYPNGVPHIGHAYEAIATDALARFQRLDGKDVFFLTGTDEHGLKMIQTAEAEKLPTLEVATRNALRFKEMDQRLNVSFDRFIRTTEEQHHRSSQAIWQRMADNGDIYLDSYAGWYSVREEAYYAEDETVVGDDEVRRGPQGSPVEWVEEKSYFFKLSAYQDKLLALYDNQPDFIGPDSRRNEVVSFVKSGLRDLSISRTTFDWGVKVPGDPEHVMYVWVDALTNYITGVGFPDESDANWRYWPADVHIIGKDIIRFHAVYWPAFLMSAGIPLQNRVYAHGFLFNKGEKMSKSVGNVVDPFNLANQYGVDQMRYFFLREVPFGQDGSYNHEAIVARINADLANDLGNLAQRSLSMIAKQHEGVLPEPGAFSDTDKAILAQADGMITLARTAMATQQIHHWLNAVWAVVAEANRYFAGEAPWALAKTDPQRQRTVLYVTAEVVRQVAILAQPAMPDCSARLLDILGIPADQRDFAGLGGAARIKPGAALPAPTGIFPRYIEPTAA*