ggKbase home page

PLM2_5_b1_sep16_scaffold_20974_5

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: comp(2829..4004)

Top 3 Functional Annotations

Value Algorithm Source
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 384.0
  • Bit_score: 604
  • Evalue 1.10e-169
peptidase M48 Ste24p Tax=Bradyrhizobium elkanii RepID=UPI000306304D similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 412.0
  • Bit_score: 605
  • Evalue 2.60e-170
protease HtpX membrane protein similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 411.0
  • Bit_score: 594
  • Evalue 2.20e-167

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium sp. DFCI-1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1176
ATGGCCGCCTATGGTCTTTATACGCACATCGCATCGAACAAGTTTCGTTCGATGCTGCTGCTCGCCGGGCTGTTCGTGCTGATCTACGTGCTGGTTTACGCCGGTGCGCTGATCGCGGAGGTGGTGATCAATAGCGACGCGTCGGTCGACTACTACCTGGTGGCGGCATCGCGCGACCTGGTGAAGGCTTTTCCTTATGCGACCGGAGCAGCGGCGCTTTGGATCGTGATCGCATATTTCTTCCATCAGTCGATGATCGACGCCGTTACCGGCGGTGAGGACGTCACCCGGCAGCAGCAGCCCCGGCTCTACAATCTCCTGGAAAATCTCTGCATCTCGCGCGGCCTCCCGATGCCGAAACTCAAGGTGATGGACAGCGAGGCATTGAACGCGTTCGCGACCGGGCTCAATCAGCGGCAATATGCCGTCACCGTCACCTCGGGCCTGTTGAAAGCGCTCAACGACCAGGAGATCGAGGCGGTGCTGGGCCACGAGCTCACCCACATCCGCAACGGCGACGTGCAACTGATGGTGATCGCAGTCATCATCGCCGGCGTGGTCGGCTTCTTCGGCGAGCTGTTTTTCCGGATGTTCACCAACCTGCAGTGGAATTCCGGCGGCGGCGGATCGTCCTGGCCGTCTTCGTCCTCGTCTTCCTCTTCGTCCTCATCCTCTTCCTCGGACCGCGACAGCAAGGGCTCCGGCGGCGCGATCTTTGTCGTCATTCTCGCGGTGGTGCTGATCATGCTGGCCTGGCTGTTGTCGCAGGTGGTGAAGCTGGCGCTGTCGCGGTCGCGCGAACTGCTGGCCGACGCCGGATCGGTCGAGCTGACGAAGAATCCCGATGCCATGATCTCGGCGCTACGCAAGATCGAGAACCGGGGCGAGCTTCCCGGAGCGACCTCGGCGGTGATGGAATTATGCGTCGATAACCCGCGCGAGGGTTTCGCCGATCTGTTTGCGACCCATCCCTCGATGGATTCCCGGGTCCAGGCGCTGGTGAAATTCGCCGGTGGACACGATCCCGGACGGCTGGCTCTGCCGTCTGACAGGGCTGATGAGCCGGACGAAGGGCCCCAGCAACCGGCATCCGCGGACACCGCCCCGCCGCTGCTGCGACGCGGCCCATGGAGCGATGCCGGTCCGTCGCCAGGCCCCTGGGGCAGACGTGTCTGA
PROTEIN sequence
Length: 392
MAAYGLYTHIASNKFRSMLLLAGLFVLIYVLVYAGALIAEVVINSDASVDYYLVAASRDLVKAFPYATGAAALWIVIAYFFHQSMIDAVTGGEDVTRQQQPRLYNLLENLCISRGLPMPKLKVMDSEALNAFATGLNQRQYAVTVTSGLLKALNDQEIEAVLGHELTHIRNGDVQLMVIAVIIAGVVGFFGELFFRMFTNLQWNSGGGGSSWPSSSSSSSSSSSSSSDRDSKGSGGAIFVVILAVVLIMLAWLLSQVVKLALSRSRELLADAGSVELTKNPDAMISALRKIENRGELPGATSAVMELCVDNPREGFADLFATHPSMDSRVQALVKFAGGHDPGRLALPSDRADEPDEGPQQPASADTAPPLLRRGPWSDAGPSPGPWGRRV*