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PLM2_5_b1_sep16_scaffold_30217_1

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: comp(2..652)

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase (GGDEF) domain-containing protein Tax=Rhizobium sp. CF080 RepID=J2TMC6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 217.0
  • Bit_score: 298
  • Evalue 4.90e-78
Diguanylate cyclase/phosphodiesterase with GAF sensor {ECO:0000313|EMBL:EUB99676.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.7
  • Coverage: 217.0
  • Bit_score: 298
  • Evalue 6.90e-78
methyl-accepting chemotaxis protein (with a HAMP region) similarity KEGG
DB: KEGG
  • Identity: 50.7
  • Coverage: 219.0
  • Bit_score: 213
  • Evalue 4.50e-53

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Taxonomy

Rhizobium sp. CF080 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
ATGTCGATTCGCTACAAGTTTTTTTTCGCCTTTAGTATTGTCATCGCCCTTGCCTGCGGGCTTGCGTTTCATGGCATGCGCAGCATCTCCACCTCCGGCGATCTTGTGGTGCGCCTCTACGACGGGCCGCTGATGGGGATCAATCATGCGCGTTCGGCGCATGCCGCATTGAACGCGGCGCGCCTTCTCATGCAGGCTGGCCTCCATGATGGCGCGCCGAAGGAAACGGTCGCGAAAATCGAAAAACTGGTCGCCGGGATCGCGGACGACCTGAAAGTCGTTCGGGATCGGGTAAGAACCAAGGATGTCACCGCGGCTTTGGAACGGACCGAAACGGAGCTGCGCGGCTGGTCGGAAATGGGGCTGAAGATCCTCAAGCCGCAGGCCGGCGGGCTTACCGCGCTTCCCATGCCTTTCTCGGTGGCCAAGAAGGGGGATGCCGCCGTTGCGGCCGTGGACGATCTGGTGGAAATGGTCGCTGCCTATGGGTTCGACTACCGCACCGAAGCCGAGGCGGCGGTCGCGGCCGCCCACACCACCATGCTCGCGCTGGCGATTGCGACGACTCTGATCGGGCTGACGCTCGCGGTCGCATTCGCGCACTCCATGAGCAAACCGATCTTCGCCGCAATGCAGATTGCGGAACATGTG
PROTEIN sequence
Length: 217
MSIRYKFFFAFSIVIALACGLAFHGMRSISTSGDLVVRLYDGPLMGINHARSAHAALNAARLLMQAGLHDGAPKETVAKIEKLVAGIADDLKVVRDRVRTKDVTAALERTETELRGWSEMGLKILKPQAGGLTALPMPFSVAKKGDAAVAAVDDLVEMVAAYGFDYRTEAEAAVAAAHTTMLALAIATTLIGLTLAVAFAHSMSKPIFAAMQIAEHV