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PLM2_5_b1_sep16_scaffold_32068_5

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: 3268..4221

Top 3 Functional Annotations

Value Algorithm Source
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.5
  • Coverage: 317.0
  • Bit_score: 505
  • Evalue 3.20e-140
5-hydroxymethyluracil DNA glycosylase Tax=Mesorhizobium sp. WSM4349 RepID=UPI00036DC45D similarity UNIREF
DB: UNIREF100
  • Identity: 79.8
  • Coverage: 317.0
  • Bit_score: 508
  • Evalue 4.50e-141
5-hydroxymethyluracil DNA glycosylase similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 317.0
  • Bit_score: 495
  • Evalue 8.60e-138

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Taxonomy

Bradyrhizobium sp. LTSP849 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
ATGCCCGAATTACCCGAAGTTGAAACCGTTCGCCGCGGCCTGCAACCGGTGATGGAGGGATCGACGATCGTGCGAGCCGAAGCCAGGCGAAAAGACCTGCGGTTTCCGTTCCAGAAGGATTTTGTCGCGCGCCTGGAGGGCCAGACCGTGACCGGGCTCGGGCGCCGCGCCAAATACCTGCTGGCCGATCTCGCCTCGGGCGACGTTCTGCTGATGCATCTGGGCATGTCGGGCTCGTTCCGCGTCATCGACGGCGAGGATCAGAAAACGCCGGGAAAATTTCACCATCCGCGAAACGAGGATCGCGCGCATGATCATGTGGTCTTTCATATGTCGTCGGGCGCGGCCGTTGTCTTCAACGACCCGCGCCGCTTCGGCTACATGAAGATCATTGCGCGCCATGCGCTGGAGGGGGAGCCGCTCCTGAGCGGCCTCGGTCCCGAACCGCTCGGCAACGAATTCGACGCGGCGATGCTGGCGCGCTCCTGTGCCAACAAGAAGACCAGCCTGAAGGCGGCGCTGCTCGATCAGCGCGTGGTCGCGGGGCTCGGCAACATCTATGTCTGCGAGGCGCTGTTTCGTTCGCATCTGTCGCCGCGGCGACTGGCCGCGACGCTGGCGACCAAAGCCGGACCACGCAAGGACGATGCTGCCGGACAACGCATGAGCGTTGCCGCCGGACAACGCAAGAGCGTTGCCGGGGGCGAACCGACCGATCACGCCAAACGTCTGGTCGATGCAATTCACGCGGTGCTGAATCAGGCGATCAAGGCCGGAGGCTCGTCGCTGCGCGATCATCGCCAGACCTCCGGCGAACTCGGCTATTTCCAGCATTCCTTTCAGGTCTACGACCGCGAAGGCGAAAAATGCCAGACCGCGGGCTGTAGCGGCATCGTGCGGCGCTTTACGCAGAACGGCCGCTCGACGTTCTGGTGCCCGAAATGCCAGAAGTGA
PROTEIN sequence
Length: 318
MPELPEVETVRRGLQPVMEGSTIVRAEARRKDLRFPFQKDFVARLEGQTVTGLGRRAKYLLADLASGDVLLMHLGMSGSFRVIDGEDQKTPGKFHHPRNEDRAHDHVVFHMSSGAAVVFNDPRRFGYMKIIARHALEGEPLLSGLGPEPLGNEFDAAMLARSCANKKTSLKAALLDQRVVAGLGNIYVCEALFRSHLSPRRLAATLATKAGPRKDDAAGQRMSVAAGQRKSVAGGEPTDHAKRLVDAIHAVLNQAIKAGGSSLRDHRQTSGELGYFQHSFQVYDREGEKCQTAGCSGIVRRFTQNGRSTFWCPKCQK*