ggKbase home page

PLM2_5_b1_sep16_scaffold_25845_4

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: 2290..3999

Top 3 Functional Annotations

Value Algorithm Source
Methanol/ethanol family PQQ-dependent dehydrogenase Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GR56_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 569.0
  • Bit_score: 1005
  • Evalue 2.10e-290
Methanol/ethanol family PQQ-dependent dehydrogenase {ECO:0000313|EMBL:ERF80087.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 569.0
  • Bit_score: 1005
  • Evalue 3.00e-290
PQQ enzyme repeat protein similarity KEGG
DB: KEGG
  • Identity: 71.3
  • Coverage: 567.0
  • Bit_score: 867
  • Evalue 1.10e-249

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium sp. DFCI-1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1710
ATGGATAAGCGTTCCATTTTGGCCGTCGCTTTGGCGGTGGTTGCCGGTATTCTGATAGGACCGGTGTTTGCGCAAGAAGTTAAGCAGCAAGCCAAATCGACATCCGGCAAGGCCAAGATTTCTTCGGTCTCGCAGGATCAGCTCAACAAGGCAGACACCAATGCCAACAACTTTCTGCTGACCAACGGCAATTACGCACAAACGCGCTTTCATCCGGCCCGGCAAATCGGGCGCAACAATGTGAAGAATCTGCACGTCGCGTGGATCTTCCAGACGGAGGTGAAGGAATCGCTTGAGACGTCGCCCATCGTCATCAACGGCGTCATGTACGTTACGACGTCGTTCAGCCACGTCTATGCACTCGACGCCAAGACCGGTGCAGAAATCTGGCACTACAAGCACAAGATGGGACCGGTAACGACCTATTGCTGCGGCCCCAACAATCGCGGCGTTCAGGTGCTCGGCGACCTCGTCTACCTCGCCACGCTTGACGCCAAGCTTGTGGCGCTCAACGCCAAGACCGGCGATGTGGTGTGGCAGAGCGATATCGCAGATCCGGAACTCGGATACAGCGAGACCATGGCTCCGACTGTCATCAAGGACAAGGTTCTGATCGGAACCAACGGCGGCGAGTATGGCATTCGCGGCTTTCTGAAAGCCTACGATGCCAAGACCGGCAAGCTGCTTTGGACGTTCAATACGGTACCGGAGAGTTCAGTCGGTGTCTGGGCGGCGAAGGACGCCACCGGCCGCGACATGCACCGCGATATCCAGGCTGAAAAGGACCAGCTGGCCAAAACCGGCGATCCCTACCAGAAGCTGGGCGGCGGCGTGTGGCAAAATCCTGCCATCGATCTGGCGACGAACCGGCTCTATTTTGTGGTCGGCAATCCATCGCCGGATCTCGATGGATCGAATCGCCCCGGCGACAATCTTTATACGGACTCGCTGGTATCCATCGATCTCGAGACCGGCAAATACGTATGCCATCTTCAATATATCGCCCATGACGTCTGGGACCTTGATGCCGTAAGCCCGCCGGTGCTGGTGGACGTCAAAGGCAAGAACGGCAAGATCATCCCGGGTGTGATTCACGCCGGCAAGACCGGTCACATCTATGTTCACGACCGCAAGGACTGCAGCCTGATCCGTTTCTCCCAAGCCATGGTGCCGCAGGAGAACATGTGGGTGCTGCCCACGAAGGAAGGCGCGCGCATGCTGCCGGGGGCCAATGGTGGTGTGGAATGGTCGCCGATCGCGACCGACCCAGGGCAGGGGCTCGCTTATGCCATCAACCTGCATCAGCCGATGACCTACCATGTCGAGAACTCGCCGTATCCGAACGGCAAGTTGTGGCTTGGCGGCGCCTTCAAGGTGATCCCGGGCGAGGCGCAGGCGGGCAATATTACCGCGGTCGACTACAATACCGGCAAGATCAAGTGGCAGGTGAAGACGCCGCAACCGATGATCGGCGGCATTCTCGCCACCGCAGGCGGCCTTGTTTTCACGGGTGAAGGCAACGGCAAGTTCGCCGCCTACAATTCGTCCACCGGCAAGGAATTGTGGAGCTTCCGCGCTGGAGCCGGCGTCAATGCGCCACCCTCCACTTACATGATCGACGGAAAGCAATATGTCGTGGTAGGTGCGGGAGGCAACGTTCAGGTCGACTTCCGCCGCGGTAACAATATCATCGCCTTCTCGCTCAATTGA
PROTEIN sequence
Length: 570
MDKRSILAVALAVVAGILIGPVFAQEVKQQAKSTSGKAKISSVSQDQLNKADTNANNFLLTNGNYAQTRFHPARQIGRNNVKNLHVAWIFQTEVKESLETSPIVINGVMYVTTSFSHVYALDAKTGAEIWHYKHKMGPVTTYCCGPNNRGVQVLGDLVYLATLDAKLVALNAKTGDVVWQSDIADPELGYSETMAPTVIKDKVLIGTNGGEYGIRGFLKAYDAKTGKLLWTFNTVPESSVGVWAAKDATGRDMHRDIQAEKDQLAKTGDPYQKLGGGVWQNPAIDLATNRLYFVVGNPSPDLDGSNRPGDNLYTDSLVSIDLETGKYVCHLQYIAHDVWDLDAVSPPVLVDVKGKNGKIIPGVIHAGKTGHIYVHDRKDCSLIRFSQAMVPQENMWVLPTKEGARMLPGANGGVEWSPIATDPGQGLAYAINLHQPMTYHVENSPYPNGKLWLGGAFKVIPGEAQAGNITAVDYNTGKIKWQVKTPQPMIGGILATAGGLVFTGEGNGKFAAYNSSTGKELWSFRAGAGVNAPPSTYMIDGKQYVVVGAGGNVQVDFRRGNNIIAFSLN*