ggKbase home page

PLM2_5_b1_sep16_scaffold_27548_3

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: comp(2014..2310)

Top 3 Functional Annotations

Value Algorithm Source
Histone family protein DNA-binding protein Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07Q73_RHOP5 similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 98.0
  • Bit_score: 171
  • Evalue 2.40e-40
histone family protein DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 87.8
  • Coverage: 98.0
  • Bit_score: 171
  • Evalue 6.80e-41
Histone family protein DNA-binding protein {ECO:0000313|EMBL:ABJ05911.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 98.0
  • Bit_score: 171
  • Evalue 3.30e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 297
ATGGCGAGGATGACGAAAAATCAGTTGATCGATGCTGTTTCGGAATCGAGTGCAGTTTCAAAGAACGACGTGAAGGCTGTCATGGAACACCTGGCGGCGGTTGGCTACAAGGAGCTGAATGAATCCGGTGAGTTTGTCATTCCTGGCTTCGTCAAAATGTCGGTGGTCAATAAGCCCGCCACGGAAGCTCGCAGCGGCATCAATCCATTCACGAAAGAGCCGATGGAATTCGCGGCCAAACCAGCGAGCAAGACCGTCAGGGCGTCGCCATTGAAAGTAGCCAAGGACGCGGTTTGA
PROTEIN sequence
Length: 99
MARMTKNQLIDAVSESSAVSKNDVKAVMEHLAAVGYKELNESGEFVIPGFVKMSVVNKPATEARSGINPFTKEPMEFAAKPASKTVRASPLKVAKDAV*