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PLM2_5_b1_sep16_scaffold_33161_5

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: 3833..4270

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-54 (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 146.0
  • Bit_score: 221
  • Evalue 1.10e-55
RNA polymerase sigma-54 factor Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H3Y3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 80.3
  • Coverage: 147.0
  • Bit_score: 224
  • Evalue 4.60e-56
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 147.0
  • Bit_score: 224
  • Evalue 6.50e-56

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Taxonomy

Bradyrhizobium sp. DFCI-1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 438
ATGGCTCTGACGCAGAGACTAGAGTTCCGCCAGTCCCAATCGCTGGTGATGACACCGCAGCTGATGCAGGCGATTAAACTGCTGCAGCTGTCGAATCTCGACCTTTCGGCCTTTGTCGAAGAGGAACTGGAGCGAAATCCGCTGCTCGAACGCGCCAATGACGGCACCGAGCCGCCGCTCGCGGGCGAACCGGCGCCGGAGCGGGCCGAATTTTCCGACCGCGACGATACAGGTTCCGCCTATGGCGACGACGCTGCCGCCGAGCGTTCCGAACTGGCCAGCGGTTCCACCGGCGACGGTTTCGAGCCGGTCCAGGAAGAATGGATGAACTGCGATCTCGGCATCCGCGCCGAGATCGATCAGACGCTGGACACCGGCCTCGACAACGTGTTTTCCGAGGAGCCCGCCGAGGCCGCCGCGCGCACCGCGCAGGACGCG
PROTEIN sequence
Length: 146
MALTQRLEFRQSQSLVMTPQLMQAIKLLQLSNLDLSAFVEEELERNPLLERANDGTEPPLAGEPAPERAEFSDRDDTGSAYGDDAAAERSELASGSTGDGFEPVQEEWMNCDLGIRAEIDQTLDTGLDNVFSEEPAEAAARTAQDA