ggKbase home page

PLM2_5_b1_sep16_scaffold_34045_3

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: comp(1021..1953)

Top 3 Functional Annotations

Value Algorithm Source
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10) similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 308.0
  • Bit_score: 289
  • Evalue 9.20e-76
5-carboxymethyl-2-hydroxymuconate Delta-isomerase {ECO:0000313|EMBL:ABP34583.1}; EC=5.3.3.10 {ECO:0000313|EMBL:ABP34583.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter.;" source="Polynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 /; CIP 109841 / QLW-P1DMWA-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.1
  • Coverage: 308.0
  • Bit_score: 289
  • Evalue 4.60e-75
5-carboxymethyl-2-hydroxymuconate Delta-isomerase Tax=Polynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1) RepID=A4SYL9_POLSQ similarity UNIREF
DB: UNIREF100
  • Identity: 48.1
  • Coverage: 308.0
  • Bit_score: 289
  • Evalue 3.20e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Polynucleobacter necessarius → Polynucleobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 933
ATGCGTCTTGCGACTTTTACCGACGAGTCGTCGAAGCCACGCTTCGGCATTGTGCGTGGCGAAAGCATCGTCGACGTCGTCGCGGCGGCCAATGCGCTGCATCTGGCGGTCCCGGCGACCACTGTGAAAATCGCTCTCACCAGCGGCGCCCATACGATTGCCGCGTTGGAAGAACTCGCGGGTTCGGCTGAACGTGCGGGCCTGCTTCGGCCTGTTGCCGGATTGAAATTCCTGCCGCCGATCCCGGACCCTTCAAAATTCTTCTGTGTCGGCAAGAACAACAGGAAGCATCGCGAGGAACTCGCTGCCAACAAGATGCTGACCGAAGTTCCGAATGAGCCCACCGGCTTCATCAAGCTGGTCTCGACGATGTCAGGCGATGGCGACGAGGTGGTCAAACCGGATGACATTACCACGCTCGATTACGAGCCGGAGCTTTGCTACGTGGTTGGCAAGCGCGCCCATGGCGTCAAGAAGGCTGACGCGATGGATTACATCTCCGGCTTCACGCTCACCAATGATGTCAGCGCGCGCGAAATCCAGAAACGCGAGGTCGCCTCCGGCAGCCGGTTCTGGACCGCCAAGAACATGCCGGGCTTCGCGCCGGTTGGCCCCTTTATTTTAACGATGGACGAAGTCGCCGACACCGACAATCTGTGGGTCACCTGTGACGTCAACGGCAAGCGGCGGCTGCGCGCCAATACCGGCGATTATCTCTACAACATCGCCGACGTGCTGGAGCACTTTTCGCGTTATGTCGTGTTCGAGCCCGGCGACCTGATCGCCATGGGGGCGCCGAGCGGCGTCGCGGTCGGACAGCCCAACGCGGCCGAGCTTTATCTGCAGCCCGGTGACGACATGGTCATTTCATTCGAAGGATTGATGTCGCTGCGAACCAGGATCGTCGCGCCGAACGGCGCTTCCAGAAAATAA
PROTEIN sequence
Length: 311
MRLATFTDESSKPRFGIVRGESIVDVVAAANALHLAVPATTVKIALTSGAHTIAALEELAGSAERAGLLRPVAGLKFLPPIPDPSKFFCVGKNNRKHREELAANKMLTEVPNEPTGFIKLVSTMSGDGDEVVKPDDITTLDYEPELCYVVGKRAHGVKKADAMDYISGFTLTNDVSAREIQKREVASGSRFWTAKNMPGFAPVGPFILTMDEVADTDNLWVTCDVNGKRRLRANTGDYLYNIADVLEHFSRYVVFEPGDLIAMGAPSGVAVGQPNAAELYLQPGDDMVISFEGLMSLRTRIVAPNGASRK*