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PLM2_5_b1_sep16_scaffold_38387_4

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: comp(2448..3137)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein Tax=Sphingomonas echinoides RepID=UPI00026CBCA5 similarity UNIREF
DB: UNIREF100
  • Identity: 74.2
  • Coverage: 229.0
  • Bit_score: 339
  • Evalue 2.60e-90
putative transcriptional regulator (winged helix domain) similarity KEGG
DB: KEGG
  • Identity: 69.9
  • Coverage: 229.0
  • Bit_score: 328
  • Evalue 1.30e-87
Putative transcriptional regulator (Winged helix domain) {ECO:0000313|EMBL:CBS88232.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.9
  • Coverage: 229.0
  • Bit_score: 328
  • Evalue 6.50e-87

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Taxonomy

Azospirillum lipoferum → Azospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGTCTCGCGCGCAACGTCTACTCGATCTCATTCAGGCGCTCCGTGGCTATCGTCGTCCCGTCAGCGGCGCGACGTTGGCCGAGGCGCTTGGGATTTCACTGCGGACTGTCTACCGGGACATCGAGACACTCAAGGCACAGGGTGCGCACATCGATGGCGAACCCGGTGTCGGCTACGTCCTGCGGCCTGGGTTCATGCTGCCGCCGCTGATGTTTTCTGAAGAGGAGATCGAAGCGATCGTTCTCGGCTCACGATGGGTGGCGGACCGGGCCGATCCGGCACTGGGCGCTGCCGCGCGCAATGCGCTTGCCAAGATCGCCGCGGTGTTGCCGCAAGACCTGAAAGTCAGTCTTGATACGTCAAGCCTTCTGGTCGGGCCTGGCAATGCCGTTGCCGCCGGTGATGCCGAGTTGCCGACCATCCGTCTGGCTATTCGCACGGAACGCAAATTGCGCATCTTCTATGTGGACGGCCGCGGGCGCGATTCAAAGCGCACCATCTGGCCATTCGCTCTGGCCTTTTTCGACCGGGTGCGCGTCGTCGTGGCGTGGTGCGAGATACGCGATGGCTATCGGCATTTCCGAACCGACCGTATCAGCAAGGTCCAGTTCGTCGACAAGCGTTATCCCCGTCGTCGTCAGGTCCTGCTGAAGGATTGGCGCGCGACCGAAGGAATCCCGGAGCAGTAA
PROTEIN sequence
Length: 230
MSRAQRLLDLIQALRGYRRPVSGATLAEALGISLRTVYRDIETLKAQGAHIDGEPGVGYVLRPGFMLPPLMFSEEEIEAIVLGSRWVADRADPALGAAARNALAKIAAVLPQDLKVSLDTSSLLVGPGNAVAAGDAELPTIRLAIRTERKLRIFYVDGRGRDSKRTIWPFALAFFDRVRVVVAWCEIRDGYRHFRTDRISKVQFVDKRYPRRRQVLLKDWRATEGIPEQ*