ggKbase home page

PLM2_5_b1_sep16_scaffold_42494_4

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: comp(2164..3780)

Top 3 Functional Annotations

Value Algorithm Source
Tat (Twin-arginine translocation) pathway signal sequence Tax=Afipia clevelandensis ATCC 49720 RepID=K8PLP2_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 85.7
  • Coverage: 538.0
  • Bit_score: 975
  • Evalue 1.30e-281
Tat (Twin-arginine translocation) pathway signal sequence {ECO:0000313|EMBL:EKS42506.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 538.0
  • Bit_score: 975
  • Evalue 1.80e-281
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 83.5
  • Coverage: 540.0
  • Bit_score: 955
  • Evalue 5.20e-276

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1617
ATGAAGCGTCGCGATTTCTTGAAATCCGTCTCCGGGATCGCCGCCGGCGCCATGGTGCCCGCTCCGGCGATCTGGTCCGCCGCCAAGGCCGACGCCCGCTCCGAGACCCTGCTGATCGTTTCTGAAAGCGGTCCCAACAATCTCGACATCCACGGCACCGGGACCAATGTGCCCGGCTACGAGGTGTCGTGGAATTGCTATGACCGGCTCATCACCCACGAGATGAAAACCGGTCCTGGCGGGGTGCCGTATTACGACCGCGACAAGATCAAGCCCGAACTCGCCGAAGACATGAATGTCGGCGACATGTCGGCGACCTTCAAATTGAAGAAGAATGCAAAATTCCACGACGGCGCGCCGGTGACGGCCAAGGACGTCAAGTGGTCGCTCGACCGCGCGATCGGCGTTGGCGGATTCCCGGCGTTCCAGATGAGCGCCGGCTCGCTGACCAAGCCGGAGCAGTTCGTCGTCGTCGATGACTACACGGTGCGAGTCGATTTCGCGAAGAAAGACCGCCTCACCATTCCTGACCTCGCCGTGATCGTGCCGTGCGTGGTCAATTCCGAACTTCTCAAGAAGAATGCCAGCGAGAAGGATCCCTGGGGTCTCGAATTTGCCAAGCAGCAGACCGTTGGTTCCGGCGCCTACAAGGTGACGAAATGGACCGCCGGCACCGAGGTTATCCTGGAGCGCAATGACGAGTGGGTCGGCGGTCCCGCGCCGAAGATCAGGCGGGTGATCTGGCGCATGGTGCCGCAGGCCGGCAATCGCCGTGCGCTGCTTGAACGCGGCGATGCCGATGTGTCGTATGATTTGCCCAACAAGGATTTCGTCGAGTTGAAGGACGGCGGCAAGCTCAACATCGTCTCGATGCCCTATTCCAACGGCATCCAGTATCTCGGCATGAACGTCACCAAGCCGCCGTTCAATAATCCGAAAGTTCGCCAGGCGGTGGCCTACGCCGTGCCCTACCAGAAGATCATGGATGCCGTGCTGTTCGGGCTGGCCAAGCCGATGTTCGGCGCCGCCGGCAAGCCGACCGAGGCGGTTTGGCCCCAGGCCCACATGTATAATACCGACATTGCGAAAGCCAAGGCGCTGCTCGCCGAAGCCGGCTACCCCGACGGCTTCGAGACCACGCTGTCATTCGATCTTGGATTCGCCGGGGTCAATGAGCCGCTTTGCGTGCTGGTGCAGGAGAGCCTCGGCCAGATCGGGATCAAGACCACCATCAATAAAATTCCCGGCGCCAACTGGCGCACCGAACTGAACAAGAAGGAGATGCCGCTTTACACCAACGTGTTCTCGGGCTGGCTCGACTATCCCGAATACTTCTTCATCTGGTGCTATCACGGCCGAAATTCGATCTTCAACACCATGGGCTATCAGTCGAAGGAAATGGACGGCTTCATCGATGGCGCCGTGGCCGCAGGCGCGAGCGGCGACAAGGCGACTTACGATACCGACGTGAGGGGTTTTATCGATCGCGCCTTCACCGACATGCCGCGCATCCCGCTGTATCAGCCCTACGTCAACGTCGCGATGCAGAAAAATGTGTCCGGCTACCAGTACTGGTTTCACCGCCGCCTGGATTACCGGGCGATGGTCAAGGCGTGA
PROTEIN sequence
Length: 539
MKRRDFLKSVSGIAAGAMVPAPAIWSAAKADARSETLLIVSESGPNNLDIHGTGTNVPGYEVSWNCYDRLITHEMKTGPGGVPYYDRDKIKPELAEDMNVGDMSATFKLKKNAKFHDGAPVTAKDVKWSLDRAIGVGGFPAFQMSAGSLTKPEQFVVVDDYTVRVDFAKKDRLTIPDLAVIVPCVVNSELLKKNASEKDPWGLEFAKQQTVGSGAYKVTKWTAGTEVILERNDEWVGGPAPKIRRVIWRMVPQAGNRRALLERGDADVSYDLPNKDFVELKDGGKLNIVSMPYSNGIQYLGMNVTKPPFNNPKVRQAVAYAVPYQKIMDAVLFGLAKPMFGAAGKPTEAVWPQAHMYNTDIAKAKALLAEAGYPDGFETTLSFDLGFAGVNEPLCVLVQESLGQIGIKTTINKIPGANWRTELNKKEMPLYTNVFSGWLDYPEYFFIWCYHGRNSIFNTMGYQSKEMDGFIDGAVAAGASGDKATYDTDVRGFIDRAFTDMPRIPLYQPYVNVAMQKNVSGYQYWFHRRLDYRAMVKA*