ggKbase home page

PLM2_5_b1_sep16_scaffold_53842_2

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: comp(2019..2852)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D006FC related cluster Tax=unknown RepID=UPI0003D006FC similarity UNIREF
DB: UNIREF100
  • Identity: 66.8
  • Coverage: 277.0
  • Bit_score: 379
  • Evalue 1.60e-102
AraC family transcriptional regulator {ECO:0000313|EMBL:ESZ23004.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.8
  • Coverage: 277.0
  • Bit_score: 379
  • Evalue 2.30e-102
transcription activator effector binding protein similarity KEGG
DB: KEGG
  • Identity: 64.3
  • Coverage: 277.0
  • Bit_score: 378
  • Evalue 1.00e-102

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. L2C084A000 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 834
ATGAGTGCCGTCGGAAAAGCGATCTGGTTCATCGAGACCCATTTTGCAGGCGACATTTCGCTCGACGACATCGCAAGGTCGGCCGGCGTGTCGCGCTACTATCTGGCGCGCGCCTTCAGCCTCGCGACGGGCCGTTCGGTCATGGGCTATGTGCGCGGGCGGCGCCTGACGGAGGCGGCGCGATCGCTTTCGAACGGCGCGCCTGATATTTTGAGCGTGGCCCTCGACACCGGTTACGGCTCTCACGAAGCATTCACGCGGGCGTTTCGCGACCAGTTCGGGCTGACGCCCGAAGCGGTGCGGGCGCAGCGCCGCACTTGCAACCTCGACCTCGTGGAGCCCATCAAGCTGGACGAGACTCTGATCGAGGACCTCAAACCAGTGCGCTTCGAGAACGGCAAGCCGCTGCTCATTGCCGGCCTCGGAGAGCGTTACACCTGGGAGAGCAGCAAGGCGATCCCGGCGCAATGGCAGCGCCTTGTCCCTTATCTCGGGACCATCCCGCGCCAGGTCGGCGGAACGACCTTCGGCGTCTCATGCAACGGCGATGACGAGGGCAATTTCGATTACATCGCCGGCACGGAAGTGGCCGATTTCTCCGGGCTTCCAACCGCCTTCAGCCGCCTGCGACTGGGCGAGCAGAAATACGCTGTATTCGCCCATCGCGAGCACATTTCGGCCATCCGCCGAACGGTCTGCACGATCTGGACCAAGTGGCTTCCGGACTCGGGACACGAGGCCGCCGATGCACCTGGTTTCGAGCGCTTCGGCGAGGCGTTCGATTTCCCGACCGGAACGGGCATTTTCGAAATCTGGATACCGATCAAGGCGTGA
PROTEIN sequence
Length: 278
MSAVGKAIWFIETHFAGDISLDDIARSAGVSRYYLARAFSLATGRSVMGYVRGRRLTEAARSLSNGAPDILSVALDTGYGSHEAFTRAFRDQFGLTPEAVRAQRRTCNLDLVEPIKLDETLIEDLKPVRFENGKPLLIAGLGERYTWESSKAIPAQWQRLVPYLGTIPRQVGGTTFGVSCNGDDEGNFDYIAGTEVADFSGLPTAFSRLRLGEQKYAVFAHREHISAIRRTVCTIWTKWLPDSGHEAADAPGFERFGEAFDFPTGTGIFEIWIPIKA*