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PLM2_5_b1_sep16_scaffold_47420_4

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: comp(1438..2043)

Top 3 Functional Annotations

Value Algorithm Source
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 94.0
  • Coverage: 201.0
  • Bit_score: 396
  • Evalue 3.50e-108
3-isopropylmalate dehydratase small subunit {ECO:0000255|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000255|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000255|HAMAP-Rule:MF_01031}; Short=IPMI {ECO:0000255|HAMAP-Rule:MF_01031};; Isopropylmalate isomerase {ECO:0000255|HAMAP-Rule:MF_01031}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 201.0
  • Bit_score: 396
  • Evalue 1.70e-107
3-isopropylmalate dehydratase small subunit Tax=Rhodopseudomonas palustris (strain BisB18) RepID=LEUD_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 201.0
  • Bit_score: 396
  • Evalue 1.20e-107

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGGACAAGTTCACCACGCTGGAGGGCGTCGCGGCGCCGCTGAAGATCATCAATGTCGATACCGACATGGTCATCCCCAAGCAGTATCTCAAAACCATCAAGCGCACCGGCCTTGGCAAGGGGCTGTTCTCGGAACAGCGCTACAAGGATGACGGCAGCGAGAACCCGGATTTCATCCTCAACAAGCCGGCCTATCGCAACGCCAAAATTCTGGTCGCGGGCGACAATTTCGGCTGCGGTTCGAGCCGCGAACACGCGCCGTGGGCGCTGCTGGATTTCGGCATCCGTTGCGTGATCTCGACCTCGTTCGGCGATATCTTCTACAACAACTGCTTCAAGAACGGCATTCTGCCGATCCGCGTCACCCAGGACGACCTCGACAAATTGTTCGACGATGCCGAACGCGGCGCCAATGCGACGCTGAGCATCGATCTCGGCAAGCAGGAAATTCGCGGGCCCGACGGCGGCACCGTGAAGTTCGAGATCGACCCGTACCGCAAGCACTGCCTGATGAACGGTCTCGACGACATCGGCCTCACCATGGAGAAGAAGGCCTCGATCGACGCCTATGAGGCGAAGGCAAAGACCGCACGCGCCTGGGCCTGA
PROTEIN sequence
Length: 202
MDKFTTLEGVAAPLKIINVDTDMVIPKQYLKTIKRTGLGKGLFSEQRYKDDGSENPDFILNKPAYRNAKILVAGDNFGCGSSREHAPWALLDFGIRCVISTSFGDIFYNNCFKNGILPIRVTQDDLDKLFDDAERGANATLSIDLGKQEIRGPDGGTVKFEIDPYRKHCLMNGLDDIGLTMEKKASIDAYEAKAKTARAWA*