ggKbase home page

PLM2_5_b1_sep16_scaffold_59716_4

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: comp(1018..1629)

Top 3 Functional Annotations

Value Algorithm Source
SSU ribosomal protein S30P / sigma 54 modulation protein Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J2E5_RHOP2 similarity UNIREF
DB: UNIREF100
  • Identity: 79.8
  • Coverage: 203.0
  • Bit_score: 329
  • Evalue 1.90e-87
Uncharacterized protein {ECO:0000313|EMBL:KIZ47761.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 203.0
  • Bit_score: 332
  • Evalue 2.40e-88
sigma 54 modulation protein/ribosomal protein S30EA similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 203.0
  • Bit_score: 329
  • Evalue 5.20e-88

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGACTCTCCGAATCTCGGGCAAAAGCATCAGTGTCGGCGACGCGCTGCGCGGGCGCGTCACCGAGCGCACCGATGAAGTCTTGCGCAAATATTTCGACGGCAATTATTCCGGCCACATCACGCTGAGCAAGGATGGTTTCGGCTTCCGCACCGACTGCGCGTTGCATCTGGATTCCGGAATTACGCTCGAGGCCGATTCCAATGCCGCCGACGCCTATAGCAGCGCCGATCAGGCGCTGGCCCAGATCGAGAAGCGGCTGCGCCGCTACAAGAGCCGTCTGAAGGATCGTTCGGCGCGAAAGTCGCACGCCGAAGCGGTTGCGATGGTGGAATTGACCGCGCCGATTCTCAATGCCCCAAGCTACGTGATCGAGGCGCCCGCGGGAGACGACGAGCACGACGAGACCGGCTACAGTCCGGTGATCATCGCCGAGGCGACGACGTCGCTGAAGCGGATGTCGGTGAGCGAAGCGGTGATGGAGCTGGACCTGACCGGCGCCGCCTGCATCGTGTTCCAGCACGGCAGCAACGGGCGGGTGAACATCATTTACAGGAGGCCGGACGGCAATGTCGGCTGGGTCGATCCTCCGGTGGTTAACTCCGGGGGGTAG
PROTEIN sequence
Length: 204
MTLRISGKSISVGDALRGRVTERTDEVLRKYFDGNYSGHITLSKDGFGFRTDCALHLDSGITLEADSNAADAYSSADQALAQIEKRLRRYKSRLKDRSARKSHAEAVAMVELTAPILNAPSYVIEAPAGDDEHDETGYSPVIIAEATTSLKRMSVSEAVMELDLTGAACIVFQHGSNGRVNIIYRRPDGNVGWVDPPVVNSGG*