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PLM2_5_b1_sep16_scaffold_75850_2

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: 1293..2912

Top 3 Functional Annotations

Value Algorithm Source
RNA binding S1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPG2_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 85.9
  • Coverage: 540.0
  • Bit_score: 910
  • Evalue 6.80e-262
RNA binding S1 similarity KEGG
DB: KEGG
  • Identity: 85.9
  • Coverage: 540.0
  • Bit_score: 910
  • Evalue 1.90e-262
RNA binding S1 {ECO:0000313|EMBL:ABE61885.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.9
  • Coverage: 540.0
  • Bit_score: 910
  • Evalue 9.50e-262

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1620
GTGGTAAACATCAATCGACAGATTGCGGAAGAACTCGGGGTCCGCGAGCAGCAGGTCGAGGCGACGGTCGCGTTGCTCGACGGCGGCGCCACGGTTCCGTTCGTGGCGCGATACCGCAAGGAAGTCACCGGCGCGCTCGACGACGCCCAATTACGCACGCTGGAAGAGCGCCTGAACTACTTGCGCGAACTTGAGGAGCGTCGCACAGCCATACTCAATTCGGTCCGCGAACAGGGCAAGCTCGATGCCGCGCTGGAAGCGGCCATCCTCGCCGCCGACAGCAAAGGACGCCTGGAAGACATCTATCTGCCGTTCAAGCCGAAGCGCCGCACCAAGGCCGAGATTGCCAAGGAGGCCGGCCTCGAGCCGTTGTCCGAACTGTTGCTGACGCAGCCGCAAAACGATCCGCAAGCGATGGCCGCTGACTTCGTCGATGCCGACAAGCAGGTGCCCGATGCAGCCGCGGCGTTGGAAGGGGCGCGCGCGATCCTGGTGGAGCGCTTCGCCGAAGACGCCGACCTGATCGGTACGTTGCGCGAGCAGGTGTGGTCGAACGGACGGGTGGCGTCCACCGTGCGCAGGGGCAAGAAGACCGAAGGCGAGAAGTTCAAGGACTATTTCGATTTCAGCGAGCCGCTGCACAAGCTGCCGTCGCACCGCATTCTGGCGATGTTCCGCGGCGAGAAGGAAGAGATCCTCGAGCTGCAGATTGAGCCCGACGCGCAAGCGCCGGCTGCGGGCGTCTCCTCTTCCTACGAGCTGAAGATCATGCAGCGCTTTGGCATTTCCGACCAGGGCCGCCCCGGCGACCGCTGGCTGGTGGAGACCGCGCGGTGGGCGTGGCGTACCAAAATTCAGGTGCACCTCAACATCGATCTGCGCATGCGGCTGTGGACCGCAGCCGAAACCGAAGCCGTGCGGGTGTTTGCATCGAATTTGCGCGACCTGTTGCTGGCGGCGCCGGCCGGCGCGCGCGTGACCATGGGCCTCGATCCCGGCTTCCGCTCCGGCGTCAAGGTCGCCGTCGTCGATGCCACCGGCAAGGTGGTGGCCACCACCGCGATCTATCCGCATGAACCGCAAAAGCGCTGGGACGAGGCGCTGGCGACGCTGGGGAAATTGGCGGTTGCGCACCGCGTCGATCTGATCGCGATCGGCAACGGCACCGCATCGCGCGAGACCGACAAACTGGCGGTGGAGCTGGTCAAGCTGCTGCCGGATCTGAAGATGTCGAAGATTGTGGTGTCGGAAGCCGGCGCTTCGGTCTATTCGGCCTCGGCCTTTGCATCCGAGGAACTGCCGGAGCTCGACGTGACCCTGCGCGGCGCGGTGTCGATCGCGCGGCGTCTGCAGGATCCGCTGGCCGAGCTGGTGAAGATCGATCCGAAGGCGATCGGGGTCGGGCAATATCAACATGACCTTGGCGAAAGCAGGCTGGCGCGCTCGCTCGATGCCGTGCTCGAAGACTGCGTCAACGCCGTCGGCGTCGACGCCAACACCGCCTCGGCGCCGCTGCTGGCGCGGGTGTCGGGCATCGGCGCGGGCCTCGCGCAAAGCATCGTGCAACATCGCGACGCCAAGGGTCCGTTCAAATCACGCAAGGCGCTGAAAGAGGTGCCG
PROTEIN sequence
Length: 540
VVNINRQIAEELGVREQQVEATVALLDGGATVPFVARYRKEVTGALDDAQLRTLEERLNYLRELEERRTAILNSVREQGKLDAALEAAILAADSKGRLEDIYLPFKPKRRTKAEIAKEAGLEPLSELLLTQPQNDPQAMAADFVDADKQVPDAAAALEGARAILVERFAEDADLIGTLREQVWSNGRVASTVRRGKKTEGEKFKDYFDFSEPLHKLPSHRILAMFRGEKEEILELQIEPDAQAPAAGVSSSYELKIMQRFGISDQGRPGDRWLVETARWAWRTKIQVHLNIDLRMRLWTAAETEAVRVFASNLRDLLLAAPAGARVTMGLDPGFRSGVKVAVVDATGKVVATTAIYPHEPQKRWDEALATLGKLAVAHRVDLIAIGNGTASRETDKLAVELVKLLPDLKMSKIVVSEAGASVYSASAFASEELPELDVTLRGAVSIARRLQDPLAELVKIDPKAIGVGQYQHDLGESRLARSLDAVLEDCVNAVGVDANTASAPLLARVSGIGAGLAQSIVQHRDAKGPFKSRKALKEVP