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PLM2_5_b1_sep16_scaffold_76049_4

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: comp(1595..2221)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Bradyrhizobium elkanii RepID=UPI00036464E6 similarity UNIREF
DB: UNIREF100
  • Identity: 76.9
  • Coverage: 186.0
  • Bit_score: 295
  • Evalue 2.30e-77
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:ERF81212.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 186.0
  • Bit_score: 295
  • Evalue 5.60e-77
putative RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 67.0
  • Coverage: 206.0
  • Bit_score: 279
  • Evalue 4.90e-73

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Taxonomy

Bradyrhizobium sp. DFCI-1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGCCCGGCCGGTGGATTGAAGCCGGCCGGGCACCCGCATTTTCTGCCAAAGCCGGGCAAAAGGCGATGCCGGTGAACAGTTCGGACGACAATCCCGAAAAGGCGCGGCGCTTTCGCGACGCCGCGCTGCCGCATCTCGACGACGTCTATACGCTGGCGCGCTACCTGCTTCGCGACGCCGCCGACGCCGAGGATGCGGTGCAGGAGTGCTATCTGCGGGCGCTGAGGCATTTTGACAGCTATCGCGGGCCGGCGATGAAGCCCTGGCTGTTCGCCATCCTGCGCAACGTCTGCCGCGCCGAATTTGCGCGGCGGGCGAGTTCACCGACCGCCCCGATCGACGATGTGCCCGACGACGCCGAGCAAACGCCGCTCTGGCACGAGGCGCAGGAAACGCCGGAGGCGCAGATGTTACATCGATGGGATTCCACAACCATAGGCCGGCTGGTGGCAGGGTTGGCCGAACCGTTTCGAGAGACCTTGGTGCTGCGCGAAATTCACGATCTATCCTACCGGGAAATCGCCGACATCGTCGGCGCGCCGGTTGGCACCGTGATGTCGCGTCTCGCCCGCGCCCGCGCCATGCTGCGATCAGCCTGGATGGCGGAAGAGGAGCAACCGAAATGA
PROTEIN sequence
Length: 209
MPGRWIEAGRAPAFSAKAGQKAMPVNSSDDNPEKARRFRDAALPHLDDVYTLARYLLRDAADAEDAVQECYLRALRHFDSYRGPAMKPWLFAILRNVCRAEFARRASSPTAPIDDVPDDAEQTPLWHEAQETPEAQMLHRWDSTTIGRLVAGLAEPFRETLVLREIHDLSYREIADIVGAPVGTVMSRLARARAMLRSAWMAEEEQPK*