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PLM2_5_b1_sep16_scaffold_91293_3

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: 1537..1965

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 142.0
  • Bit_score: 214
  • Evalue 6.50e-53
Ribonuclease VapC Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q212Q0_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 68.6
  • Coverage: 140.0
  • Bit_score: 189
  • Evalue 1.20e-45
PilT protein-like protein similarity KEGG
DB: KEGG
  • Identity: 68.6
  • Coverage: 140.0
  • Bit_score: 189
  • Evalue 3.50e-46

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 429
GTGAGCGACTTCGTCGTCGACGCGAGCGTCGCGGTGAAATGGTTCGTTGCTGAAACGGATTTTTTGGTGGCCGACGACCTTTCCGCAAGCAATCACCGGCTATTCGCGCCGCGTTTGATTATGACGGAGGTCGCAAACACCTTGGCACGCAAGGCGATGGCGGGGCTGATGTCGGCGGCGGAAGCGTGCGTGTATCTTCGCTCATTGCCGCACTATTTCGCTGGTTTTCTCGCGGTCGACGAACTGATAGAGCCAGCGCTCAAAAATGCCTGCGCAATTCGGCATCCGATCTATGACCTGATCTATCTTGAAGCGGCGCGACGTCTCGACGCGCAGCTTGTCACGGCGGACCGTAGATTTATTGCGAAGATTGCCGGTACCGACTTCGCTCGTCATGTGATGCTGCTTTCCGACTGGCGGCCCGAATGA
PROTEIN sequence
Length: 143
VSDFVVDASVAVKWFVAETDFLVADDLSASNHRLFAPRLIMTEVANTLARKAMAGLMSAAEACVYLRSLPHYFAGFLAVDELIEPALKNACAIRHPIYDLIYLEAARRLDAQLVTADRRFIAKIAGTDFARHVMLLSDWRPE*