ggKbase home page

PLM2_5_b1_sep16_scaffold_100623_2

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: 702..1673

Top 3 Functional Annotations

Value Algorithm Source
Tyrosine recombinase XerC Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21CY1_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 324.0
  • Bit_score: 534
  • Evalue 6.00e-149
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 318.0
  • Bit_score: 550
  • Evalue 1.10e-153
xerC; site-specific tyrosine recombinase XerC similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 324.0
  • Bit_score: 534
  • Evalue 1.70e-149

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 972
ATGGCCAAGCCAGTTCCCGCTGTTCAGCCGATCGAGCTTGACTGCGCCGCCGACGACATCGCGCTTCAGATGACGCGCTGGCTGTCGCATTTGCGCGCCGAGCGACGGCTGTCGCCGAAGACATCGGAGGCCTATTCCCGCGATCTCCGCCAGTGTCTCGTCTTCCTCTGCGAGCACTGGGGCACGCGGGTGACGCTTGCGCGCTTCGCGGCGCTCGAGGCCAGCGATGTCAGGGCATTCATGGCGATGCGGCGCACCGACGAGATAGGCAGCCGTTCCCTGATGCGGGCGCTGGCCGGCTTGCGCTCGTTCGGCCGCTTCCTCGAGCGGGAAGGCAATGGCAAGGTCGGCGCGTTATCAGCGATCCGCGCGCCCAAGATCGGCAAGAGCCTGCCGAAACCGATCCAGATGGCGGCGGCCAAACGTTTTGTGGATGCCGACGAACGCGCCGGCGAAACTCGCGATCCCTGGATCTGGGCGCGCGACGCCGCCGTGATGGCGCTGTTGTACGGTTCGGGCCTGCGTATCTCCGAAGCACTCGGGTTGAAACGCCGCGACGTGCCGTTACCCGGCGCGGGCGACGTGCTGATCGTGAACGGCAAGGGCAACAAGACCCGGATGGTGCCGGTGCTGCTGAACGTGCTCGCGCTGGTCCGGGATTATGTGGCGATGTGCCCGCATCCACTGCCACAGGAAGGACCGATCTTTGTCGGCGCGCGAGGTGGCCCGCTCAGTCCGCGGATCATTCAGCTCACCATGGAACGGTTGCGCGGCGCGCTCGGCGTGCCTGACAGTGCGACGCCGCATGCGCTGCGGCATTCTTTCGCGACCCACCTGCTCACGCGTGGCGGCGATCTGCGCGCGATCCAGGAGTTGCTCGGCCACGCTTCGCTCTCGACCACGCAGATTTATACCGGAATCGATACCGAGCGGCTCCTGGAAGTCTACCGCAACGCGCACCCGCGCGCCTGA
PROTEIN sequence
Length: 324
MAKPVPAVQPIELDCAADDIALQMTRWLSHLRAERRLSPKTSEAYSRDLRQCLVFLCEHWGTRVTLARFAALEASDVRAFMAMRRTDEIGSRSLMRALAGLRSFGRFLEREGNGKVGALSAIRAPKIGKSLPKPIQMAAAKRFVDADERAGETRDPWIWARDAAVMALLYGSGLRISEALGLKRRDVPLPGAGDVLIVNGKGNKTRMVPVLLNVLALVRDYVAMCPHPLPQEGPIFVGARGGPLSPRIIQLTMERLRGALGVPDSATPHALRHSFATHLLTRGGDLRAIQELLGHASLSTTQIYTGIDTERLLEVYRNAHPRA*