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PLM2_5_b1_sep16_scaffold_150026_4

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: comp(1534..1845)

Top 3 Functional Annotations

Value Algorithm Source
Riorf88 protein Tax=Agrobacterium rhizogenes RepID=Q9KW96_AGRRH similarity UNIREF
DB: UNIREF100
  • Identity: 60.0
  • Coverage: 80.0
  • Bit_score: 90
  • Evalue 7.40e-16
Riorf88 protein {ECO:0000313|EMBL:BAA97799.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 80.0
  • Bit_score: 90
  • Evalue 1.00e-15
putative HTH transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 72.0
  • Bit_score: 88
  • Evalue 7.90e-16

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
TTGGCATTCACGGTTATTGCTTTTTTCAGGTCGTCGAAGGCTAATAACGGCGTGAAAAAAGCAAGAGCGAAAAAGGCTTCTCCGAAGACCTCAAATGCGATCGACGAATTTATCGGCGCTCGGATACGCGAGCGCCGGCACGTGCTCGGTATAAGCCAAGCAGACCTCGCCGAGACCTTGGGCGTTTCGTTCCAGCAAATTCAAAAATATGAGAAGGGCGTAAACCGCGTTAGCGCGGCGCGGCTGTTCGCCATTTGCAAGGCCTTGAACGTATCGCTGTCGTCGATGTTTGAACGCGATCCGCAGGCGTGA
PROTEIN sequence
Length: 104
LAFTVIAFFRSSKANNGVKKARAKKASPKTSNAIDEFIGARIRERRHVLGISQADLAETLGVSFQQIQKYEKGVNRVSAARLFAICKALNVSLSSMFERDPQA*