ggKbase home page

PLM2_5_b1_sep16_scaffold_171288_3

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: 1888..2415

Top 3 Functional Annotations

Value Algorithm Source
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 175.0
  • Bit_score: 309
  • Evalue 2.40e-81
ruvC; Holliday junction resolvase (EC:3.1.22.4) similarity KEGG
DB: KEGG
  • Identity: 85.7
  • Coverage: 175.0
  • Bit_score: 297
  • Evalue 1.50e-78
Crossover junction endodeoxyribonuclease RuvC Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HIF4_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 175.0
  • Bit_score: 309
  • Evalue 1.70e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium sp. DFCI-1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGACATCCGCTCCGATTCGCCAACCCGTCCGCATCCTTGGCATCGATCCGGGCCTGCGCCGTACCGGCTGGGGCGTGATCGAGATCGACGGCAACCGGCTGATCTTCGTCGGCTGCGGCTCGGTGGAACCGCCTGACGGCCTGCCGCTGGCGAGCCGTCTGCTGGCGATCCATGAGGGCCTCGCCGCCGTGCTTGGCGACTTCCGCCCCGCCGAAGCCGCGGTCGAACAGACCTTCGTCAACAAGGACGGCGTCGCTACGCTGAAGCTCGGCCAGGCGCGTGGTGTTGCGATGCTGGCGCCGGCGATGTTCGGGATTTCGGTTGCGGAATACGCGCCGAACCAGGTGAAGAAAACCGTGGTCGGCGCCGGGCATGCCGACAAGAATCAGATTCTGACGATGTTGAAGATTCTGCTGCCCAAGGCCGAGCCGAAATCCCCCGATGCCGCCGACGCGCTCGCCATCGCCATCACGCACGCGCATCACCGCGCGAGCGCCATGCTGCGGCTGAGGGTGGTGGGGATATGA
PROTEIN sequence
Length: 176
MTSAPIRQPVRILGIDPGLRRTGWGVIEIDGNRLIFVGCGSVEPPDGLPLASRLLAIHEGLAAVLGDFRPAEAAVEQTFVNKDGVATLKLGQARGVAMLAPAMFGISVAEYAPNQVKKTVVGAGHADKNQILTMLKILLPKAEPKSPDAADALAIAITHAHHRASAMLRLRVVGI*